RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 WDR41Q9HAD4 459 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 MYNNQ9NPC7 610 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 MIEF1Q9NQG6 463 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 BAIAP2L1Q9UHR4 511 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 CAPN7Q9Y6W3 813 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 MAU2Q9Y6X3 613 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 H0YIG0 161 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 FOXS1O43638 330 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 SLC22A3O75751 556 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 SCELO95171 688 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 MED26O95402 600 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 UMODP07911 640 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 IL3P08700 152 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 DDX5P17844 614 aaKnown RBP11.36□□□□□ -0.59
UPF3A-210ENST00000493727 CPN2P22792 545 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 TACR1P25103 407 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 TLX1P31314 330 aaPredicted RBP11.36□□□□□ -0.59
UPF3A-210ENST00000493727 RPL3P39023 403 aaKnown RBP11.36□□□□□ -0.59
UPF3A-210ENST00000493727 OR1D4P47884 311 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 ALDH9A1P49189 494 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 CLNS1AP54105 237 aaKnown RBP11.36□□□□□ -0.59
UPF3A-210ENST00000493727 LIM2P55344 173 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 KLC1Q07866 573 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 C2orf80Q0P641 193 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 HEPACAMQ14CZ8 416 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 TERF2Q15554 542 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 C1QL3Q5VWW1 255 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 PRMT9Q6P2P2 845 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 PAOXQ6QHF9 649 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 IKBIPQ70UQ0 350 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 OVCH1Q7RTY7 1134 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 PPP1R32Q7Z5V6 425 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 GPR180Q86V85 440 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 ARHGEF39Q8N4T4 335 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 OR5T3Q8NGG3 340 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 ERP27Q96DN0 273 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 C11orf24Q96F05 449 aaPredicted RBP11.36□□□□□ -0.59
UPF3A-210ENST00000493727 MAPKAP1Q9BPZ7 522 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 BRINP2Q9C0B6 783 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 ZNF552Q9H707 407 aaPredicted RBP11.36□□□□□ -0.59
UPF3A-210ENST00000493727 CLK4Q9HAZ1 481 aaKnown RBP11.36□□□□□ -0.59
UPF3A-210ENST00000493727 ZNF304Q9HCX3 659 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 LYRM4Q9HD34 91 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 SAR1AQ9NR31 198 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 ZIM2Q9NZV7 527 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 ARMCX1Q9P291 453 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 MAPRE3Q9UPY8 281 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 GPR45Q9Y5Y3 372 aa11.36□□□□□ -0.59
UPF3A-210ENST00000493727 NR5A2O00482 541 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 CHST10O43529 356 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 CNOT3O75175 753 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 CBX6O95503 412 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 IGLV1-40P01703 118 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 NR2F6P10588 404 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 RNH1P13489 461 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 COX7A2P14406 83 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 PRPS1L1P21108 318 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 ITGA3P26006 1051 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 PIK3R1P27986 724 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 HNRNPH2P55795 449 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 RAB38P57729 211 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 UFM1P61960 85 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 MAT1AQ00266 395 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 TNFRSF17Q02223 184 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 MAPRE2Q15555 327 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 PLEKHN1Q494U1 663 aaPredicted RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 AGKQ53H12 422 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 NDUFAF5Q5TEU4 345 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 MRM1Q6IN84 353 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 R3HCC1LQ7Z5L2 792 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 CA13Q8N1Q1 262 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 CPSF7Q8N684 471 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 FAM47BQ8NA70 645 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 ADAMTS18Q8TE60 1221 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 TM4SF18Q96CE8 201 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 SNRNP40Q96DI7 357 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 PRPF18Q99633 342 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 MYLK2Q9H1R3 596 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 SDR39U1Q9NRG7 319 aaPredicted RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 AGPAT4Q9NRZ5 378 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 SEMA3GQ9NS98 782 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 SLC22A11Q9NSA0 550 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 TEX10Q9NXF1 929 aaPredicted RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 CCDC167Q9P0B6 97 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 TRPC4Q9UBN4 977 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 DAPP1Q9UN19 280 aa11.35□□□□□ -0.59
UPF3A-210ENST00000493727 MRPS33Q9Y291 106 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 WBP11Q9Y2W2 641 aaKnown RBP11.35□□□□□ -0.59
UPF3A-210ENST00000493727 C9JVG2 144 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 SCAMP2O15127 329 aaKnown RBP11.34□□□□□ -0.59
UPF3A-210ENST00000493727 SLC22A2O15244 555 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 AIFM1O95831 613 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 POU3F2P20265 443 aaPredicted RBP11.34□□□□□ -0.59
UPF3A-210ENST00000493727 GPX3P22352 226 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 JAK1P23458 1154 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 CLDN8P56748 225 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 KCNK10P57789 538 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms