RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 SZRD1Q7Z422 152 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 ANKRD37Q7Z713 158 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 PCYOX1LQ8NBM8 494 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 ADCY4Q8NFM4 1077 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 SUN3Q8TAQ9 357 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 NACC2Q96BF6 587 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 CCDC115Q96NT0 180 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 INPP5KQ9BT40 448 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 EFCAB1Q9HAE3 211 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 SLC52A3Q9NQ40 469 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 LUZP4Q9P127 313 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 CROCCQ5TZA2 2017 aa12.52□□□□□ -0.41
MSH6-208ENST00000493177 PIEZO2Q9H5I5 2752 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 IGKV3D-11A0A0A0MRZ8 115 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 IGHV3-20A0A0C4DH32 117 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 TCRBV16S1A1N1A0A5B0 115 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 C17orf105B2RV13 164 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 SOCS6O14544 535 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 SCN2BO60939 215 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 GSNP06396 782 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 CYC1P08574 325 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 CALB2P22676 271 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 FRKP42685 505 aaPredicted RBP12.51□□□□□ -0.41
MSH6-208ENST00000493177 NUDT2P50583 147 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 HBA1P69905 142 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 EEF1A2Q05639 463 aaKnown RBP12.51□□□□□ -0.41
MSH6-208ENST00000493177 MLC1Q15049 377 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 CEBPEQ15744 281 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 IGFBP7Q16270 282 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 SFT2D3Q587I9 215 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 COQ5Q5HYK3 327 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 TMEM107Q6UX40 140 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 ZNF621Q6ZSS3 439 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 CCDC121Q6ZUS5 278 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 DHDDSQ86SQ9 333 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 RETREG3Q86VR2 466 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 GALNT12Q8IXK2 581 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 ZADH2Q8N4Q0 377 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 GTF2H4Q92759 462 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 KAT2AQ92830 837 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 RIT1Q92963 219 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 C8orf44Q96CB5 159 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 NEUROD4Q9HD90 331 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 ADAP2Q9NPF8 381 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 GID8Q9NWU2 228 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 TAS2R9Q9NYW1 312 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.51□□□□□ -0.41
MSH6-208ENST00000493177 VPS4AQ9UN37 437 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 HS3ST3B1Q9Y662 390 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 CLCA3PQ9Y6N3 262 aa12.51□□□□□ -0.41
MSH6-208ENST00000493177 SMG1Q96Q15 3661 aaKnown RBP12.5□□□□□ -0.41
MSH6-208ENST00000493177 A0A096LPI6 279 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 ATP1B1P05026 303 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 MC3RP41968 323 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 CDKN2CP42773 168 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 TRPC1P48995 793 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 MNAT1P51948 309 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 ZNF267Q14586 743 aaPredicted RBP12.5□□□□□ -0.41
MSH6-208ENST00000493177 ELAVL1Q15717 326 aaKnown RBP12.5□□□□□ -0.41
MSH6-208ENST00000493177 FAM111BQ6SJ93 734 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 TMEM205Q6UW68 189 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 DGAT2L6Q6ZPD8 337 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 CPEB2Q7Z5Q1 589 aaKnown RBP12.5□□□□□ -0.41
MSH6-208ENST00000493177 TRIML2Q8N7C3 387 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 OR5AK3PQ8NH89 298 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 CPT1CQ8TCG5 803 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 THOC3Q96J01 351 aaKnown RBP12.5□□□□□ -0.41
MSH6-208ENST00000493177 SMAD5Q99717 465 aaKnown RBP12.5□□□□□ -0.41
MSH6-208ENST00000493177 EPS8L2Q9H6S3 715 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 CXorf36Q9H7Y0 433 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 ZNF160Q9HCG1 818 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 SERHLQ9NQF3 203 aa12.5□□□□□ -0.41
MSH6-208ENST00000493177 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 RNF103-CHMP3A0A140T963 221 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 B2RBV5 119 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 ERN1O75460 977 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 SEC24DO94855 1032 aaPredicted RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 HPP00738 406 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 CT62P0C5K7 136 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 UQCRC2P22695 453 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 GALNSP34059 522 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 CHI3L1P36222 383 aaPredicted RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 PRKAG1P54619 331 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 MRPS35P82673 323 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 FOXK1P85037 733 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 CAPRIN1Q14444 709 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 PRICKLE4Q2TBC4 344 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 TRMT5Q32P41 509 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 GTDC1Q4AE62 458 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 ZNF628Q5EBL2 1059 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 AGAP7PQ5VUJ5 663 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 JMJD6Q6NYC1 403 aaPredicted RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 PAPD4Q6PIY7 484 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 KIRREL2Q6UWL6 708 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms