RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CALML5Q9NZT1 146 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 TMEFF2Q9UIK5 374 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 PILRBQ9UKJ0 227 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 LIPT1Q9Y234 373 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 MRPS33Q9Y291 106 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 SH3GLB1Q9Y371 365 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 FAM32AQ9Y421 112 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 TESMINQ9Y4I5 508 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 PCDHGB3Q9Y5G1 929 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 LYVE1Q9Y5Y7 322 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 COL5A1P20908 1838 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 ARID1BQ8NFD5 2236 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 RP1P56715 2156 aa8.58□□□□□ -1.04
SMARCC1-208ENST00000492896 UNC13CQ8NB66 2214 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 A0A087WV62 115 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 A0A0G2JPF8 293 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 A0A1B0GTQ1 180 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 MYOCOSA0A1B0GUC4 107 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FITM1A5D6W6 292 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 PRAMEF25A6NGN4 478 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 DUXAA6NLW8 204 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 HNRNPCL2B2RXH8 293 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 HNRNPCL3B7ZW38 293 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FAM227AF5H4B4 570 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 YKT6O15498 198 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FOXS1O43638 330 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 MED26O95402 600 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 CLIC3O95833 236 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 RECKO95980 971 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FESP07332 822 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 HNRNPCL4P0DMR1 293 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 RHCEP18577 417 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 NELFEP18615 380 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 CSF2RBP32927 897 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 KCNJ5P48544 419 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 MAN2A2P49641 1150 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 DAPP51397 102 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 EMP3P54852 163 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 CDH12P55289 794 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 KCNAB2Q13303 367 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 COL9A2Q14055 689 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 LAPTM4AQ15012 233 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 NR0B2Q15466 257 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 DUSP7Q16829 419 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FAM214AQ32MH5 1076 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 AMZ1Q400G9 498 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 CYP27C1Q4G0S4 372 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FHL5Q5TD97 284 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 KDM4DQ6B0I6 523 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FAHD1Q6P587 224 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 TTC33Q6PID6 262 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 KANSL1Q7Z3B3 1105 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 PRSS42Q7Z5A4 293 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 ZNF605Q86T29 641 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 CYP4Z1Q86W10 505 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 C8orf59Q8N0T1 100 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 ZNF786Q8N393 782 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 Q8N9G6 341 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 ATG16L2Q8NAA4 619 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 OR10G2Q8NGC3 310 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 OR4C15Q8NGM1 316 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 GIPC3Q8TF64 312 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 APOBEC4Q8WW27 367 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 PIGKQ92643 395 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 CCDC74AQ96AQ1 378 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 RBCK1Q9BYM8 510 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 AMBRA1Q9C0C7 1298 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 RIBC2Q9H4K1 309 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 ANKRA2Q9H9E1 313 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 CACYBPQ9HB71 228 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 KRT84Q9NSB2 600 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 FAM118AQ9NWS6 357 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 GIN1Q9NXP7 522 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 MAT2BQ9NZL9 334 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 HCN3Q9P1Z3 774 aa8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 C19orf53Q9UNZ5 99 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-208ENST00000492896 SDK1Q7Z5N4 2213 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ASXL3Q9C0F0 2248 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 H0YIG0 161 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 J3KTA2 159 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 BCKDKO14874 412 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 CASC3O15234 703 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 B4GAT1O43505 415 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 OR10H2O60403 315 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PLOD3O60568 738 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 MITFO75030 526 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 COQ9O75208 318 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 JRKO75564 520 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 SEC24DO94855 1032 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 GADD45GO95257 159 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 CLPTM1O96005 669 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ALPPP05187 535 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ALOX5P09917 674 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 SLC35E2P0CK97 266 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 ACP2P11117 423 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 PIGAP37287 484 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 YAP1P46937 504 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 RPS6KA3P51812 740 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 HSD11B2P80365 405 aa8.56□□□□□ -1.04
SMARCC1-208ENST00000492896 IL1RL1Q01638 556 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms