RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 MAOAP21397 527 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 HOXD12P35452 270 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NR0B1P51843 470 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PHC1P78364 1004 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CDC73Q6P1J9 531 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ERICH5Q6P6B1 374 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RNF111Q6ZNA4 994 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SPRED1Q7Z699 444 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CLEC14AQ86T13 490 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ZNF605Q86T29 641 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 HIPK1Q86Z02 1210 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ERI1Q8IV48 349 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SAMD14Q8IZD0 417 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ADGRF3Q8IZF5 1079 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ZNF540Q8NDQ6 660 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 OR9A2Q8NGT5 310 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SAP25Q8TEE9 199 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RASSF5Q8WWW0 418 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 GAL3ST3Q96A11 431 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 TMEM125Q96AQ2 219 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NACC2Q96BF6 587 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 GPR78Q96P69 363 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PHF12Q96QT6 1004 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 TWSG1Q9GZX9 223 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ANKRA2Q9H9E1 313 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ADPRHL2Q9NX46 363 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 LYARQ9NX58 379 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 TEX10Q9NXF1 929 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 BAIAP2Q9UQB8 552 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 MED16Q9Y2X0 877 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CSNK1G3Q9Y6M4 447 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 U3KQV3 271 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CHD7Q9P2D1 2997 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NSG1A0A0A6YYJ2 146 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PRSS51A0A1B0GVH4 220 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 FAM240BA0A1B0GVZ2 78 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 DHRS12A0PJE2 317 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ARGFXA6NJG6 315 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 LOC110117498-PIK3R3F6TDL0 507 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 MEN1O00255 615 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 UBFD1O14562 309 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PCDHGA12O60330 932 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NOBOXO60393 691 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CTSVO60911 334 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RSL1D1O76021 490 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 BCHEP06276 602 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 LINGO3P0C6S8 592 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CD1CP29017 333 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 IDH2P48735 452 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CLCN2P51788 898 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 AQP4P55087 323 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RPS18P62269 152 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 FZD5Q13467 585 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 COL19A1Q14993 1142 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RSPO4Q2I0M5 234 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 GTDC1Q4AE62 458 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NADK2Q4G0N4 442 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 TMEM35AQ53FP2 167 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 MTX3Q5HYI7 312 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ABHD17BQ5VST6 288 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 REP15Q6BDI9 236 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 TMEM53Q6P2H8 277 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 EPGNQ6UW88 154 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RASSF6Q6ZTQ3 369 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ZFAND4Q86XD8 727 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RNF130Q86XS8 419 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SMYD1Q8NB12 490 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 MFSD9Q8NBP5 474 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CLEC1AQ8NC01 280 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 BAHD1Q8TBE0 780 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PHOSPHO1Q8TCT1 267 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 COL21A1Q96P44 957 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CD180Q99467 661 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NTMT1Q9BV86 223 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NRSN2Q9GZP1 204 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 Q9N2J8 555 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 LUZP4Q9P127 313 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 MRTO4Q9UKD2 239 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 GSTK1Q9Y2Q3 226 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PCDHGA4Q9Y5G9 962 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 B3GALT1Q9Y5Z6 326 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 MTCL1Q9Y4B5 1905 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CCDC187A0A096LP49 1063 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SAGE2PA6NJ88 616 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PLOD3O60568 738 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 STK17BO94768 372 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 OR12D1P0DN82 309 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RGS8P57771 180 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 CDKL1Q00532 357 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ZNF33BQ06732 778 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 IL18R1Q13478 541 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RABL3Q5HYI8 236 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 GCNT6Q5T4J0 391 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 INTS11Q5TA45 600 aaKnown RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 OR5M10Q6IEU7 315 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 OR52E8Q6IFG1 317 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SLC23A3Q6PIS1 610 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 FAM111BQ6SJ93 734 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 C6orf15Q6UXA7 325 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms