RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SLC22A16Q86VW1 577 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 OR4K5Q8NGD3 323 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 MGLLQ99685 303 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 APOOQ9BUR5 198 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 POLMQ9NP87 494 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ACSL5Q9ULC5 683 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 SEC16AO15027 2179 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 SYNDIG1LA6NDD5 238 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 FCMRO60667 390 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 C5AR1P21730 350 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 FRKP42685 505 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 SRSF5Q13243 272 aaKnown RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ITPRIPL2Q3MIP1 535 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF542PQ5EBM4 170 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 TJAP1Q5JTD0 557 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 C6orf132Q5T0Z8 1188 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF776Q68DI1 518 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ANKRD54Q6NXT1 300 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 FAM111BQ6SJ93 734 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 DENND6BQ8NEG7 585 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 OR1E3Q8WZA6 343 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 TMEM203Q969S6 136 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 VMP1Q96GC9 406 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 CDADC1Q9BWV3 514 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-220ENST00000492280 ASB4Q9Y574 426 aa11.73□□□□□ -0.53
HMGN1-220ENST00000492280 KIAA0513O60268 411 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 CLEC3AO75596 197 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ZIC2O95409 532 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 TP53P04637 393 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 PVRP15151 417 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 CDH3P22223 829 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 GRK3P35626 688 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ERVK-21P61565 698 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 SIM1P81133 766 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 MXD1Q05195 221 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 OXA1LQ15070 435 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF404Q494X3 552 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 CCNJQ5T5M9 372 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ACSM5Q6NUN0 579 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 TBC1D19Q8N5T2 526 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 FLCNQ8NFG4 579 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF607Q96SK3 696 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 NEURL2Q9BR09 285 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 WDR12Q9GZL7 423 aaKnown RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 TMEM168Q9H0V1 697 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 TPK1Q9H3S4 243 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 CAPN10Q9HC96 672 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 PLCXD1Q9NUJ7 323 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 CLN6Q9NWW5 311 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 MKLN1Q9UL63 735 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 YARS2Q9Y2Z4 477 aaKnown RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 GPC6Q9Y625 555 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 MUC3AQ02505 3323 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 METTL15A6NJ78 407 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 P2RX6O15547 441 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 SSX4O60224 188 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 CYP7B1O75881 506 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ADH1BP00325 375 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 EGFP01133 1207 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 RPLP0P05388 317 aaKnown RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF888P0CJ79 500 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 OSMP13725 252 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ACSL1P33121 698 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ACTR1BP42025 376 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 PXNP49023 591 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ACTR1AP61163 376 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 RPS21P63220 83 aaKnown RBP11.72□□□□□ -0.53
HMGN1-220ENST00000492280 RELAQ04206 551 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF91Q05481 1191 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 DEFB134Q4QY38 66 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 PRSS41Q7RTY9 318 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 RAB42Q8N4Z0 105 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 FAM46DQ8NEK8 389 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 OR2L8Q8NGY9 312 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 LCN9Q8WX39 176 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 QRFPRQ96P65 431 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 OPALINQ96PE5 141 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 FNDC11Q9BVV2 318 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF229Q9UJW7 825 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 TSC22D4Q9Y3Q8 395 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 DSPPQ9NZW4 1301 aa11.72□□□□□ -0.53
HMGN1-220ENST00000492280 NPIPA5A0A0B4J1W7 369 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 PRSS38A1L453 326 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 NPIPA7E9PJI5 369 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 CTDSP2O14595 271 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 CBFA2T3O75081 653 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 CNOT3O75175 753 aaKnown RBP11.71□□□□□ -0.53
HMGN1-220ENST00000492280 GPX5O75715 221 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 KLF8O95600 359 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-220ENST00000492280 ADAP00813 363 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 EIF2S1P05198 315 aaKnown RBP11.71□□□□□ -0.53
HMGN1-220ENST00000492280 NPIPA8P0DM63 369 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 HOXB2P14652 356 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 CD79BP40259 229 aa11.71□□□□□ -0.53
HMGN1-220ENST00000492280 ALDH6A1Q02252 535 aaKnown RBP11.71□□□□□ -0.53
HMGN1-220ENST00000492280 PPP2R2DQ66LE6 453 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms