RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 OR2T11Q8NH01 316 aa22.72■■□□□ 1.23
UPF3A-209ENST00000492270 TRMOQ9BU70 441 aa22.72■■□□□ 1.23
UPF3A-209ENST00000492270 NXF5Q9H1B4 397 aaKnown RBP22.72■■□□□ 1.23
UPF3A-209ENST00000492270 TUBB1Q9H4B7 451 aa22.72■■□□□ 1.23
UPF3A-209ENST00000492270 PROK2Q9HC23 129 aa22.72■■□□□ 1.23
UPF3A-209ENST00000492270 SUCOQ9UBS9 1254 aaKnown RBP22.72■■□□□ 1.23
UPF3A-209ENST00000492270 ACOT7O00154 380 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 TYROBPO43914 113 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 FBXW4P57775 412 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 C2orf80Q0P641 193 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 ZNF628Q5EBL2 1059 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 KANK2Q63ZY3 851 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 NOXRED1Q6NXP6 359 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 C3P1Q6ZMU1 363 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 FBXW8Q8N3Y1 598 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 TMEM251Q8N6I4 163 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 OR52R1Q8NGF1 315 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 OR9A2Q8NGT5 310 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.71■■□□□ 1.23
UPF3A-209ENST00000492270 KAT2AQ92830 837 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 ZDHHC11Q9H8X9 412 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 IL1RL2Q9HB29 575 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 SLC35C2Q9NQQ7 365 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 PLSCR2Q9NRY7 297 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 CNOT11Q9UKZ1 510 aaKnown RBP22.71■■□□□ 1.23
UPF3A-209ENST00000492270 ENTPD4Q9Y227 616 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 NPFFR2Q9Y5X5 522 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 LIPGQ9Y5X9 500 aa22.71■■□□□ 1.23
UPF3A-209ENST00000492270 NPHS1O60500 1241 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 DDCP20711 480 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 ARRB2P32121 409 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 MAGEA5P43359 124 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 GSTM5P46439 218 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 ARL13AQ5H913 290 aaPredicted RBP22.7■■□□□ 1.22
UPF3A-209ENST00000492270 FAM71E1Q6IPT2 247 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 Q6ZSR9 355 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 SLC22A16Q86VW1 577 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 DOLPP1Q86YN1 238 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 DND1Q8IYX4 353 aaKnown RBP22.7■■□□□ 1.22
UPF3A-209ENST00000492270 ZNF675Q8TD23 568 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 ITLN2Q8WWU7 325 aaPredicted RBP22.7■■□□□ 1.22
UPF3A-209ENST00000492270 PHF12Q96QT6 1004 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 MYNNQ9NPC7 610 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 EXO1Q9UQ84 846 aaKnown RBP22.7■■□□□ 1.22
UPF3A-209ENST00000492270 DNAJC15Q9Y5T4 150 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.7■■□□□ 1.22
UPF3A-209ENST00000492270 CRYBG3Q68DQ2 2970 aa22.7■■□□□ 1.22
UPF3A-209ENST00000492270 SEC22BO75396 215 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 NME6O75414 186 aaPredicted RBP22.69■■□□□ 1.22
UPF3A-209ENST00000492270 CELA3AP09093 270 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 PRPH2P23942 346 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 TACR1P25103 407 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 PTGS2P35354 604 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 KCNJ2P63252 427 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 ADORA2A-AS1P86434 159 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 KIAA0040Q15053 153 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 RPS6KA2Q15349 733 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 CEBPEQ15744 281 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 BICRALQ6AI39 1079 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 TICAM1Q8IUC6 712 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 C17orf47Q8NEP4 570 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 AGR3Q8TD06 166 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 EGLN2Q96KS0 407 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 GIMAP4Q9NUV9 329 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 EHD3Q9NZN3 535 aa22.69■■□□□ 1.22
UPF3A-209ENST00000492270 SLC28A1O00337 649 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 RGS16O15492 202 aaPredicted RBP22.68■■□□□ 1.22
UPF3A-209ENST00000492270 TPOP07202 933 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 LINC00032P0C843 101 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 ESRRAP11474 423 aaPredicted RBP22.68■■□□□ 1.22
UPF3A-209ENST00000492270 ABCD3P28288 659 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 ETV4P43268 484 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 EMDP50402 254 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 CD163Q86VB7 1156 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 FAM109AQ8N4B1 249 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 FAM76AQ8TAV0 307 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 FAM57AQ8TBR7 257 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 DIO2Q92813 273 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 ZIM3Q96PE6 472 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 LRTM1Q9HBL6 345 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 C1orf109Q9NX04 203 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 CNIH4Q9P003 139 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 CFL2Q9Y281 166 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 MEMO1Q9Y316 297 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 HRH3Q9Y5N1 445 aa22.68■■□□□ 1.22
UPF3A-209ENST00000492270 PHF3Q92576 2039 aaKnown RBP22.67■■□□□ 1.22
UPF3A-209ENST00000492270 LRRC3CA6NJW4 275 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 NPIPB8E9PQR5 432 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 PRRG2O14669 202 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 RGS14O43566 566 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 BPGMP07738 259 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 RFPL3SP0C7P2 107 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 NRG3P56975 720 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 HYAL4Q2M3T9 481 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 UGT3A2Q3SY77 523 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 SH2D4BQ5SQS7 431 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 DESI1Q6ICB0 168 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 RGS9BPQ6ZS82 235 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 MRGPRGQ86SM5 289 aa22.67■■□□□ 1.22
UPF3A-209ENST00000492270 SAMD14Q8IZD0 417 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms