RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 PRKCDQ05655 676 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 ZNF404Q494X3 552 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 XKR6Q5GH73 641 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 ENTHD1Q8IYW4 607 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 C2orf73Q8N5S3 287 aaPredicted RBP10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 KBTBD8Q8NFY9 601 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 CHAC2Q8WUX2 184 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 COL21A1Q96P44 957 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 COPS4Q9BT78 406 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 DSN1Q9H410 356 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 EHD1Q9H4M9 534 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 SYNDIG1Q9H7V2 258 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 ICKQ9UPZ9 632 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 WBP11Q9Y2W2 641 aaKnown RBP10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 KCNE2Q9Y6J6 123 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 U3KQA8 63 aa10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 FASNP49327 2511 aaKnown RBP10.85□□□□□ -0.67
LCLAT1-211ENST00000491680 PNMA8CA0A1B0GUJ8 204 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 GABRR3A8MPY1 467 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 TNFRSF11BO00300 401 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 ATP6V1G1O75348 118 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 LRATO95237 230 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CPSF4O95639 269 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 LAMP1P11279 417 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 BMP4P12644 408 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 F3P13726 295 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 DDX5P17844 614 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 KRT20P35900 424 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 SLC19A1P41440 591 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 MAP2K4P45985 399 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 RAB28P51157 221 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 VBP1P61758 197 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 INSM1Q01101 510 aaPredicted RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PPP1R8Q12972 351 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 ZNF630Q2M218 657 aaPredicted RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 TIMM50Q3ZCQ8 353 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 IFI44LQ53G44 452 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CRB2Q5IJ48 1285 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CATSPEREQ5SY80 951 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PRAMEF13Q5VWM6 474 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 TRIM40Q6P9F5 258 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 LCTLQ6UWM7 567 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PAGE2Q7Z2X7 111 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 MARCH9Q86YJ5 346 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 ARMC8Q8IUR7 673 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 DNAJC22Q8N4W6 341 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 OR52N2Q8NGI0 321 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 OR52E1Q8NGJ3 308 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 MCFD2Q8NI22 146 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 NDNFQ8TB73 568 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 SLC5A11Q8WWX8 675 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 SMPDL3AQ92484 453 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 BARD1Q99728 777 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 MAPKAP1Q9BPZ7 522 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 XKR8Q9H6D3 395 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 RUBCNLQ9H714 662 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 KIR3DX1Q9H7L2 352 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CNOT2Q9NZN8 540 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 ANKMY1Q9P2S6 941 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CLCA2Q9UQC9 943 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 DYRK1BQ9Y463 629 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 HEBP2Q9Y5Z4 205 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PMF1-BGLAPU3KQ54 211 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 USP24Q9UPU5 2620 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 EFCAB10A6NFE3 127 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 hCG_2039718K7EN88 272 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PRICKLE3O43900 615 aaPredicted RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 AIREO43918 545 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 UPK1BO75841 260 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 MT-CO3P00414 261 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 RPLP0P05388 317 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 ANXA4P09525 319 aaPredicted RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 C1GALT1C1LP0DN25 315 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 ETV6P41212 452 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PIK3CBP42338 1070 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 TMED10P49755 219 aaKnown RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 TSTA3Q13630 321 aaPredicted RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 MICAQ29983 383 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PERM1Q5SV97 790 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 NXPE4Q6UWF7 544 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 NCCRP1Q6ZVX7 275 aaPredicted RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 SLC46A3Q7Z3Q1 461 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 VTCN1Q7Z7D3 282 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 TMPRSS11BQ86T26 416 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 ZNF605Q86T29 641 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CCDC71Q8IV32 467 aaPredicted RBP10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 OR6C4Q8NGE1 309 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 OR4C15Q8NGM1 316 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 OR2L8Q8NGY9 312 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.84□□□□□ -0.672e-7■■■□□ 15.5
LCLAT1-211ENST00000491680 APH1BQ8WW43 257 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 SLC39A7Q92504 469 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CCDC3Q9BQI4 270 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 BTBD2Q9BX70 525 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 CDCA4Q9BXL8 241 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 TWSG1Q9GZX9 223 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 DCSTAMPQ9H295 470 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 SPNS1Q9H2V7 528 aa10.84□□□□□ -0.67
LCLAT1-211ENST00000491680 REEP4Q9H6H4 257 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms