RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CSNK2A1P68400 391 aaPredicted RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 PHEXP78562 749 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 SHC2P98077 582 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ENPEPQ07075 957 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 LGALS3BPQ08380 585 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 SPOCK1Q08629 439 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 PMPCAQ10713 525 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 SLAQ13239 276 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 STXBP2Q15833 593 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 KIF19Q2TAC6 998 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 USP41Q3LFD5 358 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ANXA2RQ3ZCQ2 193 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 FAM76BQ5HYJ3 339 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 THEM4Q5T1C6 240 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 CCNYL2Q5T2Q4 361 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 SEL1L3Q68CR1 1132 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 TMEM211Q6ICI0 200 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 AADACL2Q6P093 401 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 GJB7Q6PEY0 223 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 SYCE2Q6PIF2 218 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ZNF474Q6S9Z5 364 aaPredicted RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 KIAA1324Q6UXG2 1013 aaKnown RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 RBM44Q6ZP01 1051 aaKnown RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 BHLHA15Q7RTS1 189 aaPredicted RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 DHDDSQ86SQ9 333 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 GPR180Q86V85 440 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 MAP7D3Q8IWC1 876 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 FAM71AQ8IYT1 594 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 RCOR2Q8IZ40 523 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 GALNT16Q8N428 558 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 CPXM2Q8N436 756 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 MARVELD2Q8N4S9 558 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 CSNK2A3Q8NEV1 391 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 OR5T1Q8NG75 326 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 LMO3Q8TAP4 145 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ZNF596Q8TC21 504 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 DTX3LQ8TDB6 740 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 FAM172AQ8WUF8 416 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 C1orf54Q8WWF1 131 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 DDB2Q92466 427 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ESAMQ96AP7 390 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 MTBPQ96DY7 904 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ERLEC1Q96DZ1 483 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 C16orf58Q96GQ5 468 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 TMEM68Q96MH6 324 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 BIRC8Q96P09 236 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ABHD14AQ9BUJ0 271 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 GATA5Q9BWX5 397 aaPredicted RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 TM2D2Q9BX73 214 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 SEMA4CQ9C0C4 833 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 MTIF3Q9H2K0 278 aaKnown RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 SLCO5A1Q9H2Y9 848 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 FN3KQ9H479 309 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 TMEM185BQ9H7F4 350 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ACTR8Q9H981 624 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 MRM3Q9HC36 420 aaKnown RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 S100A14Q9HCY8 104 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 APMAPQ9HDC9 416 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 NT5MQ9NPB1 228 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 UBE2TQ9NPD8 197 aaPredicted RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 NRBP2Q9NSY0 501 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 ZCCHC3Q9NUD5 404 aaKnown RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 TAS2R14Q9NYV8 317 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 PDP1Q9P0J1 537 aaPredicted RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 RCOR3Q9P2K3 495 aaPredicted RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 CHRNA9Q9UGM1 479 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 BCAP29Q9UHQ4 241 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 NIP7Q9Y221 180 aaKnown RBP eCLIP4.47□□□□□ -1.69
RTN4-215ENST00000491592 AAR2Q9Y312 384 aaKnown RBP4.47□□□□□ -1.69
RTN4-215ENST00000491592 IFT52Q9Y366 437 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 PKP3Q9Y446 797 aa4.47□□□□□ -1.69
RTN4-215ENST00000491592 SHANK3Q9BYB0 1731 aa4.46□□□□□ -1.69
RTN4-215ENST00000491592 ITGB4P16144 1822 aa4.46□□□□□ -1.69
RTN4-215ENST00000491592 ARFGEF1Q9Y6D6 1849 aa4.46□□□□□ -1.69
RTN4-215ENST00000491592 A0A0B4J293 547 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 A0A0G2JND7 137 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 A0A0J9YVX5 310 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 A0A0U1RQV5 110 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 A0A1W2PR77 199 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 ANKDD1BA6NHY2 528 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 OR5K4A6NMS3 321 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 PDZK1P1A8MUH7 402 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 CTDSPLO15194 276 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 RAD51BO15315 384 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 RNF13O43567 381 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 KLK8O60259 260 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 TOM1O60784 492 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 RBBP9O75884 186 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 DDNO94850 711 aaPredicted RBP4.46□□□□□ -1.7
RTN4-215ENST00000491592 PROSCO94903 275 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 TNFAIP8O95379 198 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 PLAUP00749 431 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 HMBSP08397 361 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 ALPIP09923 528 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 ALDOCP09972 364 aaKnown RBP4.46□□□□□ -1.7
RTN4-215ENST00000491592 SNHG28P0DPA3 235 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 MCF2P10911 925 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 AKR1A1P14550 325 aa4.46□□□□□ -1.7
RTN4-215ENST00000491592 DARSP14868 501 aaKnown RBP4.46□□□□□ -1.7
RTN4-215ENST00000491592 FBLP22087 321 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms