RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ASB5Q8WWX0 329 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 DIO2Q92813 273 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 KLHL29Q96CT2 875 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 NTNG2Q96CW9 530 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 APIPQ96GX9 242 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 JSRP1Q96MG2 331 aaPredicted RBP16.52■□□□□ 0.24
HMGN1-219ENST00000491183 SPOCK3Q9BQ16 436 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 TTYH2Q9BSA4 534 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 DOHHQ9BU89 302 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 ANGPTL4Q9BY76 406 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 BRINP2Q9C0B6 783 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 ACKR4Q9NPB9 350 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 MCM8Q9UJA3 840 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 ACAD8Q9UKU7 415 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 PSME2Q9UL46 239 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 ABCA12Q86UK0 2595 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 TP53I11O14683 189 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 ESRRBO95718 433 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 CBX7O95931 251 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 GLI4P10075 376 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 ABCD3P28288 659 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 CHRNB4P30926 498 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 CASP3P42574 277 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 PKNOX1P55347 436 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 LCP2Q13094 533 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 RPS6KA2Q15349 733 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 LTB4RQ15722 352 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 TRMT12Q53H54 448 aaKnown RBP16.51■□□□□ 0.23
HMGN1-219ENST00000491183 TBCELQ5QJ74 424 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 C6orf163Q5TEZ5 329 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 FNDC7Q5VTL7 733 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 DESI1Q6ICB0 168 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 SCIMPQ6UWF3 145 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 ACAD11Q709F0 780 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 GBP7Q8N8V2 638 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-219ENST00000491183 EIF1ADQ8N9N8 165 aaKnown RBP16.51■□□□□ 0.23
HMGN1-219ENST00000491183 SARAFQ96BY9 339 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 C11orf24Q96F05 449 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-219ENST00000491183 TREX2Q9BQ50 279 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-219ENST00000491183 FAIM2Q9BWQ8 316 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 SLC6A15Q9H2J7 730 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 EXO5Q9H790 373 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 QPCTLQ9NXS2 382 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 BCAP29Q9UHQ4 241 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 DLGAP4Q9Y2H0 992 aa16.51■□□□□ 0.23
HMGN1-219ENST00000491183 NKX2-6A6NCS4 301 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 FIGNL2A6NMB9 653 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 ENO4A6NNW6 628 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 PCDH7O60245 1069 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 TOXO94900 526 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 ENO1P06733 434 aaKnown RBP16.5■□□□□ 0.23
HMGN1-219ENST00000491183 ABCB1P08183 1280 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-219ENST00000491183 IL3P08700 152 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 TRPC1P48995 793 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 FOXA1P55317 472 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 NRG3P56975 720 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 TFF3Q07654 80 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 WLSQ5T9L3 541 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 TMEM198Q66K66 360 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 ZYG11AQ6WRX3 759 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 CCDC116Q8IYX3 515 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 CCNYL1Q8N7R7 359 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 TRIM44Q96DX7 344 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-219ENST00000491183 RILPQ96NA2 401 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 SECISBP2Q96T21 854 aaKnown RBP16.5■□□□□ 0.23
HMGN1-219ENST00000491183 ITPAQ9BY32 194 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 NPDC1Q9NQX5 325 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-219ENST00000491183 UTS2RQ9UKP6 389 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 STK38LQ9Y2H1 464 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 ZNF780BQ9Y6R6 833 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 MYO9AB2RTY4 2548 aa16.5■□□□□ 0.23
HMGN1-219ENST00000491183 SERTM1A2A2V5 107 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 FAM90A27PA6NNH2 459 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 WDR1O75083 606 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 GLRA3O75311 464 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 SNX4O95219 450 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 PROCP04070 461 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 DRD2P14416 443 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 PCSK2P16519 638 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 NAGAP17050 411 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 SLCO1A2P46721 670 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 EMDP50402 254 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 MRPS35P82673 323 aaKnown RBP16.49■□□□□ 0.23
HMGN1-219ENST00000491183 BTKQ06187 659 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 NNATQ16517 81 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 B3GNT6Q6ZMB0 384 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 MEX3BQ6ZN04 569 aaKnown RBP16.49■□□□□ 0.23
HMGN1-219ENST00000491183 OR52R1Q8NGF1 315 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 NEIL3Q8TAT5 605 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 C16orf78Q8WTQ4 265 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 LCORQ96JN0 433 aaPredicted RBP16.49■□□□□ 0.23
HMGN1-219ENST00000491183 ZNF597Q96LX8 424 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 GNRHR2Q96P88 292 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 C12orf65Q9H3J6 166 aaKnown RBP16.49■□□□□ 0.23
HMGN1-219ENST00000491183 ANKRA2Q9H9E1 313 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 MID1IP1Q9NPA3 183 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 ALKBH4Q9NXW9 302 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 CFL2Q9Y281 166 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 PLLPQ9Y342 182 aa16.49■□□□□ 0.23
HMGN1-219ENST00000491183 PDZD2O15018 2839 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms