RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZNF334Q9HCZ1 680 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 CHMP1AQ9HD42 196 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 DIMT1Q9UNQ2 313 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 A0A0X1KG70 313 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 C1orf196B1AJZ1 125 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 LRRTM2O43300 516 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 CA12O43570 354 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 NARSO43776 548 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 UQCRC2P22695 453 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 EDNRBP24530 442 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 TRIM23P36406 574 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 MRPL19P49406 292 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 EPHA5P54756 1037 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 BEX3Q00994 111 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 RAB11FIP2Q7L804 512 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 GPR155Q7Z3F1 870 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 TMED4Q7Z7H5 227 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 DDX53Q86TM3 631 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 OAFQ86UD1 273 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF366Q8N895 744 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 SLAIN1Q8ND83 568 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 ADAMTS15Q8TE58 950 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 FBXW5Q969U6 566 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 DDOQ99489 341 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 TRAF4Q9BUZ4 470 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 FN3KQ9H479 309 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 OSGEPL1Q9H4B0 414 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 RETREG1Q9H6L5 497 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 PGAP2Q9UHJ9 254 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 ASB1Q9Y576 335 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 TNRC6CQ9HCJ0 1690 aaKnown RBP10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 PAPPAQ13219 1627 aa10.74□□□□□ -0.69
CRNKL1-204ENST00000490910 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ANXA2P2A6NMY6 339 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ANXA2P07355 339 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ACVR1BP36896 505 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 TAF13Q15543 124 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 FAM76BQ5HYJ3 339 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ZDHHC20Q5W0Z9 365 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 RAET1GQ6H3X3 334 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 MTFR2Q6P444 385 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 B3GLCTQ6Y288 498 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 NLRP8Q86W28 1048 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 NPLOC4Q8TAT6 608 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ISG20Q96AZ6 181 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 TIFAQ96CG3 184 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 KATNB1Q9BVA0 655 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 BOCQ9BWV1 1114 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 WDR26Q9H7D7 661 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SIRT5Q9NXA8 310 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 DNMT3BQ9UBC3 853 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 GMEB2Q9UKD1 530 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 TRIP11Q15643 1979 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 METTL21EPA6NDL7 271 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ACSM4P0C7M7 580 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 HOXA9P31269 272 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 GIPRP48546 466 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 KHKP50053 298 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 DLX5P56178 289 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 RPS26P62854 115 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 BAMBIQ13145 260 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 TRAM2Q15035 370 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 LRRC37A5PQ49AS3 106 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 C3orf38Q5JPI3 329 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 CTSL3PQ5NE16 218 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 FAM69AQ5T7M9 428 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ZCCHC12Q6PEW1 402 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 C17orf64Q86WR6 236 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ADGRG3Q86Y34 549 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 TBC1D20Q96BZ9 403 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 PDLIM5Q96HC4 596 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ARL5BQ96KC2 179 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 NEUROD4Q9HD90 331 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SCML2Q9UQR0 700 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF705EA8MWA4 302 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ZBTB42B2RXF5 422 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 PRAMEF12O95522 483 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 PPP3CBP16298 524 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 POU3F3P20264 500 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ZP3P21754 424 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 MAPK9P45984 424 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 EVX1P49640 407 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ILKQ13418 452 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 DOC2AQ14183 400 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 MBTPS1Q14703 1052 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SLC9A5Q14940 896 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 GSG1LQ6UXU4 331 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 OTOP2Q7RTS6 562 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 GID4Q8IVV7 300 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 GPC2Q8N158 579 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SPRYD4Q8WW59 207 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 DPF3Q92784 378 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 CD84Q9UIB8 345 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 NOP16Q9Y3C1 178 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 C2orf78A6NCI8 922 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 NAP1L6A6NFF2 107 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SMAD9O15198 467 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 KDELR3O43731 214 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms