RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PROCRQ9UNN8 238 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 MRPS33Q9Y291 106 aaKnown RBP6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 PCDHGB1Q9Y5G3 927 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 URADA6NGE7 173 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 SLC22A20A6NK97 555 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 TP53I11O14683 189 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 PJA2O43164 708 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 LDB3O75112 727 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 TBX6O95947 436 aaPredicted RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 TGFAP01135 160 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 CLPSP04118 112 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 CD3EP07766 207 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 PTNP21246 168 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 HNRNPH1P31943 449 aaKnown RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 MSH2P43246 934 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 LIM2P55344 173 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 IGLV3-21P80748 117 aaPredicted RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 ID2Q02363 134 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 STX4Q12846 297 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 CTBP1Q13363 440 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 SERTAD2Q14140 314 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 EBPQ15125 230 aaKnown RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 EXOC3L2Q2M3D2 409 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 ASTE1Q2TB18 679 aaPredicted RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 TOR1AIP1Q5JTV8 583 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 DARS2Q6PI48 645 aaKnown RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF793Q6ZN11 406 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 UBE2R2Q712K3 238 aaPredicted RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 PIWIL4Q7Z3Z4 852 aaKnown RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 P4HA3Q7Z4N8 544 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 LINC00523Q86TU6 105 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 HOMEZQ8IX15 550 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 TRPV3Q8NET8 790 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 GAL3ST3Q96A11 431 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 SNF8Q96H20 258 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 FBXL20Q96IG2 436 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 GAL3ST4Q96RP7 486 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 HAUS8Q9BT25 410 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 CACNG6Q9BXT2 260 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 BHLHE41Q9C0J9 482 aaPredicted RBP6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 ACTR6Q9GZN1 396 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 OR10A4Q9H209 315 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 GOLPH3Q9H4A6 298 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 CHRAC1Q9NRG0 131 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 CHMP5Q9NZZ3 219 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 ADAMTS6Q9UKP5 1117 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 DAPP1Q9UN19 280 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 PDE10AQ9Y233 779 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 CRYL1Q9Y2S2 319 aa6.35□□□□□ -1.39
PDLIM1-203ENST00000490391 IGHV4-61A0A0C4DH41 118 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 MACROD2A1Z1Q3 448 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 SHISA9B4DS77 424 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 ERI3O43414 337 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 SPOPO43791 374 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 B3GALT2O43825 422 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 TSPAN15O95858 294 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 ENO3P13929 434 aaPredicted RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 TNNI3P19429 210 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 PSMB1P20618 241 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 CCND1P24385 295 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 CERS1P27544 350 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 RPL22P35268 128 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 GCKP35557 465 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 SRP14P37108 136 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 PTGDSP41222 190 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 STT3AP46977 705 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 ARFIP2P53365 341 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 SLC37A1P57057 533 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 BSPH1Q075Z2 132 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 PCDH1Q08174 1060 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 GGTLC2Q14390 218 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 FGFBP1Q14512 234 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 EFTUD2Q15029 972 aaKnown RBP eCLIP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 SLC18A3Q16572 532 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 OCLNQ16625 522 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 ANGPTL8Q6UXH0 198 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 DEF8Q6ZN54 512 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 FAM214BQ7L5A3 538 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 IFNEQ86WN2 208 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 RCOR2Q8IZ40 523 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 WDSUB1Q8N9V3 476 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 FAM71DQ8N9W8 422 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 OR1J4Q8NGS1 313 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 OR56A3Q8NH54 315 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 FNDC9Q8TBE3 224 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 KRT35Q92764 455 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 NEIL2Q969S2 332 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 ALKBH8Q96BT7 664 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 MS4A6EQ96DS6 147 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 ADAD1Q96M93 576 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 NAP1L5Q96NT1 182 aaPredicted RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 NUP62CLQ9H1M0 184 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 SERHLQ9NQF3 203 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 PLSCR4Q9NRQ2 329 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 CISD1Q9NZ45 108 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 KLHL42Q9P2K6 505 aa6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 WBP11Q9Y2W2 641 aaKnown RBP6.34□□□□□ -1.39
PDLIM1-203ENST00000490391 LRIT2A6NDA9 550 aa6.33□□□□□ -1.4
PDLIM1-203ENST00000490391 DPRXA6NFQ7 191 aa6.33□□□□□ -1.4
PDLIM1-203ENST00000490391 B4DXG7 233 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms