RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GPSM1Q86YR5 675 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 PDIK1LQ8N165 341 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 ZNF615Q8N8J6 731 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 SNX31Q8N9S9 440 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 FAM83FQ8NEG4 500 aaPredicted RBP7.45□□□□□ -1.22
USP39-216ENST00000490193 OR7G3Q8NG95 312 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 SLC44A1Q8WWI5 657 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 RIT1Q92963 219 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 ADIPOR1Q96A54 375 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 ESAMQ96AP7 390 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 RGMAQ96B86 450 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 CTHRC1Q96CG8 243 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 CFAP36Q96G28 342 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 MS4A14Q96JA4 679 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 MARK4Q96L34 752 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 CCL19Q99731 98 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 G6PC3Q9BUM1 346 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 ZNF717Q9BY31 904 aaPredicted RBP7.45□□□□□ -1.22
USP39-216ENST00000490193 OR2B2Q9GZK3 357 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 RHOJQ9H4E5 214 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 CXorf21Q9HAI6 301 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 ZNF226Q9NYT6 803 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 MOCS1Q9NZB8 636 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 PACSIN3Q9UKS6 424 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 CHMP2BQ9UQN3 213 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 ASB4Q9Y574 426 aa7.45□□□□□ -1.22
USP39-216ENST00000490193 A0A1W2PNV4 684 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 SAP18O00422 153 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 GNB5O14775 395 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 HCRTR2O43614 444 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 TMCC2O75069 709 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 PRKRAO75569 313 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 CNOT4O95628 575 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 CRHP06850 196 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 ABCB1P08183 1280 aaPredicted RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 NR2F6P10588 404 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 ABCD3P28288 659 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 LOXP28300 417 aaPredicted RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 SSTR4P31391 388 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 GCKP35557 465 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 PIK3CBP42338 1070 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 GFRA1P56159 465 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 NRG3P56975 720 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 ATP6V0D1P61421 351 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 POU4F1Q01851 419 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 KRTAP1-1Q07627 177 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 CBLBQ13191 982 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 SNTA1Q13424 505 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 MORF4L2Q15014 288 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 PPP1R7Q15435 360 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 OR4D1Q15615 310 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 FBXO48Q5FWF7 155 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 GRHL2Q6ISB3 625 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 SLC30A6Q6NXT4 461 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 ENPP6Q6UWR7 440 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 YRDCQ86U90 279 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 GCNT2Q8N0V5 402 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 SPC24Q8NBT2 197 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 OR1J4Q8NGS1 313 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 ACTRT1Q8TDG2 376 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 DOK4Q8TEW6 326 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 UCN3Q969E3 161 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 INTS12Q96CB8 462 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 PERPQ96FX8 193 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 WFIKKN1Q96NZ8 548 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 CENPKQ9BS16 269 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 SORBS1Q9BX66 1292 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 CD244Q9BZW8 370 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 OR51B5Q9H339 312 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 DDX31Q9H8H2 851 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 LYARQ9NX58 379 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 NSMCE4AQ9NXX6 385 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 C6orf203Q9P0P8 240 aaPredicted RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 ASIC3Q9UHC3 531 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 EXO1Q9UQ84 846 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 JRKLQ9Y4A0 524 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 SONP18583 2426 aaKnown RBP7.44□□□□□ -1.22
USP39-216ENST00000490193 CUBNO60494 3623 aa7.44□□□□□ -1.22
USP39-216ENST00000490193 A0A0A6YYD5 115 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 GOLGA6L10A0A0M3HER8 536 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 A0A1W2PR48 441 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 H0Y3Z8 333 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 TMPRSS11DO60235 418 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CCNT2O60583 730 aaKnown RBP7.43□□□□□ -1.22
USP39-216ENST00000490193 SH3BGRLO75368 114 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 PPM1BO75688 479 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CBR3O75828 277 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 SOX30O94993 753 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CT62P0C5K7 136 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CCDC166P0CW27 439 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 PCNAP12004 261 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CD1DP15813 335 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 GPX3P22352 226 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CCKARP32238 428 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 BSGP35613 385 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CD79BP40259 229 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 PTGDSP41222 190 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 PTH2RP49190 550 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 LHX2P50458 406 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 RAP1GDS1P52306 607 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms