RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 NANOGQ9H9S0 305 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 GPATCH2Q9NW75 528 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 CLCA3PQ9Y6N3 262 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 CFAP47Q6ZTR5 3102 aa12.46□□□□□ -0.42
TRAIP-210ENST00000489948 FRYQ5TBA9 3013 aa12.46□□□□□ -0.42
TRAIP-210ENST00000489948 IGHV1-45A0A0A0MS14 117 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 OR6C76A6NM76 312 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 EVPLLA8MZ36 301 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 SOCS6O14544 535 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 GYG2O15488 501 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 ASNA1O43681 348 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 CLPSP04118 112 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 COX6A1P12074 109 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 BMP2P12643 396 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 GPX2P18283 190 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 PTGER1P34995 402 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 CHI3L1P36222 383 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 SLC7A2P52569 658 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 RPS18P62269 152 aaKnown RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 PCOLCEQ15113 449 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 SPDYE7PQ495Y7 208 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 CRTC2Q53ET0 693 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 PAPD4Q6PIY7 484 aaKnown RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 BNC2Q6ZN30 1099 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 PPP1R32Q7Z5V6 425 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 RAB43Q86YS6 212 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 DEFB107AQ8IZN7 70 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 ZNF615Q8N8J6 731 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 NUP43Q8NFH3 380 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 OR1N1Q8NGS0 311 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 OR5AK3PQ8NH89 298 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 SLC2A12Q8TD20 617 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 ADAMTS17Q8TE56 1095 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 AURKBQ96GD4 344 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 IP6K3Q96PC2 410 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 LPAR4Q99677 370 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 MMADHCQ9H3L0 296 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 IKZF5Q9H5V7 419 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 GPN2Q9H9Y4 310 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 IL1RL2Q9HB29 575 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 PNO1Q9NRX1 252 aaKnown RBP12.45□□□□□ -0.42
TRAIP-210ENST00000489948 GIN1Q9NXP7 522 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 ERVK-19Q9WJR5 959 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 CFL2Q9Y281 166 aa12.45□□□□□ -0.42
TRAIP-210ENST00000489948 MYOCOSA0A1B0GUC4 107 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 TTC36A6NLP5 189 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 NME4O00746 187 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 CREG1O75629 220 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 SOX30O94993 753 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 LIFP15018 202 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 MAP3K8P41279 467 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 GPR143P51810 404 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 SLC37A1P57057 533 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 EEFSECP57772 596 aaKnown RBP12.44□□□□□ -0.42
TRAIP-210ENST00000489948 MTPNP58546 118 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 DUSP8Q13202 625 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 CLN3Q13286 438 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 TP53BP2Q13625 1128 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 IL10RAQ13651 578 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 ZNF267Q14586 743 aaPredicted RBP12.44□□□□□ -0.42
TRAIP-210ENST00000489948 TRMT12Q53H54 448 aaKnown RBP12.44□□□□□ -0.42
TRAIP-210ENST00000489948 SAMD4BQ5PRF9 694 aaKnown RBP12.44□□□□□ -0.42
TRAIP-210ENST00000489948 FAAH2Q6GMR7 532 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 MFSD12Q6NUT3 480 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 KIRREL2Q6UWL6 708 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 C6orf120Q7Z4R8 191 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 MRGPREQ86SM8 312 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 SERPINA11Q86U17 422 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 CALHM3Q86XJ0 350 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 LGI4Q8N135 537 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 B3GNT7Q8NFL0 401 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 OR11G2Q8NGC1 345 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 ZNF721Q8TF20 911 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 FGF11Q92914 225 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 SLC35G5Q96KT7 338 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 CNPPD1Q9BV87 410 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 OR10A5Q9H207 317 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 THUMPD1Q9NXG2 353 aaKnown RBP12.44□□□□□ -0.42
TRAIP-210ENST00000489948 COPS7AQ9UBW8 275 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 PRODH2Q9UF12 536 aa12.44□□□□□ -0.42
TRAIP-210ENST00000489948 NCOR2Q9Y618 2525 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 ATRXP46100 2492 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 PCSK5Q92824 1860 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 FAM220BPB1ANY3 271 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 HRKO00198 91 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 DNAJC8O75937 253 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-210ENST00000489948 HMGN2P05204 90 aaKnown RBP12.43□□□□□ -0.42
TRAIP-210ENST00000489948 HSD17B1P14061 328 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 TNNI3P19429 210 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 SPINK2P20155 84 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 SSTR4P31391 388 aa12.43□□□□□ -0.42
TRAIP-210ENST00000489948 PRIM2P49643 509 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms