RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RP2O75695 350 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 AQP8O94778 261 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 DIRAS1O95057 198 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ALDOBP05062 364 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 HEXAP06865 529 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 GABRA1P14867 456 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 PPP3CBP16298 524 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 FPR3P25089 353 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC6A4P31645 630 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 S100A11P31949 105 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 KDELR2P33947 212 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 BTCP35070 178 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CD79BP40259 229 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ADH7P40394 386 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ACTR1BP42025 376 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RFX3P48380 749 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SUOXP51687 545 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 EFNA5P52803 228 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 GEMP55040 296 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TAS2R60P59551 318 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ACTR1AP61163 376 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RAP2BP61225 183 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SNRPEP62304 92 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SNRPGP62308 76 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RNF4P78317 190 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TNFRSF17Q02223 184 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SOX4Q06945 474 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 MAD2L1Q13257 205 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ILKQ13418 452 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TPBGQ13641 420 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 GK2Q14410 553 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 KCNAB1Q14722 419 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SMCO1Q147U7 214 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RBBP7Q16576 425 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ST3GAL2Q16842 350 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 GOLGA7BQ2TAP0 167 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC25A52Q3SY17 297 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM174BQ3ZCQ3 159 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CDNFQ49AH0 187 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 XKR3Q5GH77 459 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 OR2B11Q5JQS5 317 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF468Q5VIY5 522 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 LIPKQ5VXJ0 399 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RAET1GQ6H3X3 334 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 C22orf42Q6IC83 251 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 PSAPL1Q6NUJ1 521 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SWSAP1Q6NVH7 229 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CDC42EP5Q6NZY7 148 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ALKAL2Q6UX46 152 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ALKAL1Q6UXT8 129 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ASB18Q6ZVZ8 466 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 BTN2A1Q7KYR7 527 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SERPINA11Q86U17 422 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 LDLRAD3Q86YD5 345 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CILP2Q8IUL8 1156 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TP53INP2Q8IXH6 220 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 OR4N4Q8N0Y3 316 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ARMC10Q8N2F6 343 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC43A2Q8N370 569 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RYBPQ8N488 228 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC44A3Q8N4M1 653 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SPICQ8N5J4 248 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC5A8Q8N695 610 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 PXT1Q8NFP0 134 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 BPIFCQ8NFQ6 507 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 OR52P1PQ8NH57 321 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 IL31RAQ8NI17 732 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ACOT12Q8WYK0 555 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM143Q96AN5 459 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 EXOSC8Q96B26 276 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ORAI1Q96D31 301 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ELMOD3Q96FG2 381 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 LCORQ96JN0 433 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 C7orf34Q96L11 122 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 OR52E6Q96RD3 313 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 FCRL5Q96RD9 977 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 PFDN5Q99471 154 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 C7orf50Q9BRJ6 194 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CACNG6Q9BXT2 260 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 DPY30Q9C005 99 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ABHD16BQ9H3Z7 469 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CDCP1Q9H5V8 836 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TDRD3Q9H7E2 651 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TCF7L1Q9HCS4 588 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 PTPRHQ9HD43 1115 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 KLHL1Q9NR64 748 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC22A11Q9NSA0 550 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 C14orf105Q9NVL8 296 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 MALT1Q9UDY8 824 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 CLEC2DQ9UHP7 191 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 SIX4Q9UIU6 781 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF225Q9UK10 706 aa4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 RPL36Q9Y3U8 105 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-206ENST00000489853 TRDV1A0A1B0GX56 115 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC9B1P1A6NJY1 282 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 SUPT3HB4E1H0 165 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 DISC1C4P0D8 188 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 FFAR3O14843 346 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 TO15178 435 aa4.51□□□□□ -1.69
SNRNP40-206ENST00000489853 GPR42O15529 346 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms