RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	FAM173A	Q9BQD7	235 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	TUBB1	Q9H4B7	451 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	KCNK9	Q9NPC2	374 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	DEPP	Q9NTK1	212 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	ZNF639	Q9UID6	485 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	TMED5	Q9Y3A6	229 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	PTPN13	Q12923	2485 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	POLE	Q07864	2286 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	WIPF3	A6NGB9	483 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772		G3V3Y1	287 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	TP53I11	O14683	189 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	PIP5K1B	O14986	540 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	LSM1	O15116	133 aa	Known RBP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	HS6ST1	O60243	411 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	WISP2	O76076	250 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	HSPA4L	O95757	839 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	CBX7	O95931	251 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	LDLR	P01130	860 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	SERPINE1	P05121	402 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	CCL3	P10147	92 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	PCSK2	P16519	638 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	GPX3	P22352	226 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	TMED10	P49755	219 aa	Known RBP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	NCBP2	P52298	156 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	DCAF7	P61962	342 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	PPIA	P62937	165 aa	Known RBP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	MRPS35	P82673	323 aa	Known RBP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	DUSP2	Q05923	314 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	EXOSC7	Q15024	291 aa	Known RBP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	LTB4R	Q15722	352 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	CEBPE	Q15744	281 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	NTRK2	Q16620	822 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	UGT3A2	Q3SY77	523 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	GALNTL6	Q49A17	601 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	TRMT12	Q53H54	448 aa	Known RBP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	LYPD8	Q6UX82	237 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	SLC22A16	Q86VW1	577 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	FAM9C	Q8IZT9	166 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	FAM13C	Q8NE31	585 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	OR10G3	Q8NGC4	313 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	OR5M3	Q8NGP4	307 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	OR9A2	Q8NGT5	310 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	OR6Y1	Q8NGX8	325 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	OR2T11	Q8NH01	316 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	ZNF675	Q8TD23	568 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	PAQR8	Q8TEZ7	354 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	RELT	Q969Z4	430 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	PKNOX2	Q96KN3	472 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	IL1RL2	Q9HB29	575 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	SH2D2A	Q9NP31	389 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	TAS2R7	Q9NYW3	318 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	CNIH4	Q9P003	139 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772	NPFFR2	Q9Y5X5	522 aa		10.22	□□□□□ -0.77
GGA1-222	ENST00000489772		A0A0G2JMM0	328 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772		A0A1W2PPB8	328 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772		A0A1W2PRS3	328 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	PINLYP	A6NC86	204 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	FAM166B	A8MTA8	275 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	KIR3DP1	A8MWS1	328 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	TMEM114	B3SHH9	223 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	ACOX3	O15254	700 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	CDC40	O60508	579 aa	Known RBP eCLIP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	SLITRK5	O94991	958 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	SNUPN	O95149	360 aa	Known RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	TACR1	P25103	407 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	NTS	P30990	170 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	ARRB2	P32121	409 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	PIGA	P37287	484 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	DNASE1L1	P49184	302 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	RPL38	P63173	70 aa	Known RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	KCNJ2	P63252	427 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	RPP38	P78345	283 aa	Known RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	DUSP8	Q13202	625 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	ESPL1	Q14674	2120 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	RPS6KA2	Q15349	733 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	CHI3L2	Q15782	390 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	RFTN2	Q52LD8	501 aa	Predicted RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	TBCEL	Q5QJ74	424 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	MTFR2	Q6P444	385 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	PAOX	Q6QHF9	649 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	TMEM64	Q6YI46	380 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	FJX1	Q86VR8	437 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	SPPL2C	Q8IUH8	684 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	FBXW8	Q8N3Y1	598 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	KAT2A	Q92830	837 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	HSPBAP1	Q96EW2	488 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	LCOR	Q96JN0	433 aa	Predicted RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	FCRL1	Q96LA6	429 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	PPP3R2	Q96LZ3	170 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	PAIP2	Q9BPZ3	127 aa	Known RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	ITPA	Q9BY32	194 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	TTTY12	Q9BZ98	90 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	SUCO	Q9UBS9	1254 aa	Known RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	ZDHHC2	Q9UIJ5	367 aa		10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	10.21	□□□□□ -0.78
GGA1-222	ENST00000489772	SPTAN1	Q13813	2472 aa	Known RBP	10.2	□□□□□ -0.78
GGA1-222	ENST00000489772	DOPEY1	Q5JWR5	2465 aa		10.2	□□□□□ -0.78
GGA1-222	ENST00000489772	MYO1G	B0I1T2	1018 aa		10.2	□□□□□ -0.78
GGA1-222	ENST00000489772	CCL21	O00585	134 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms