RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 MTERF3Q96E29 417 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 SPACA9Q96E40 222 aaPredicted RBP11.92□□□□□ -0.5
PHF1-210ENST00000488767 ZBED6CLQ96FA7 236 aaPredicted RBP11.92□□□□□ -0.5
PHF1-210ENST00000488767 TAAR6Q96RI8 345 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 SLX1AQ9BQ83 275 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 REEP4Q9H6H4 257 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 ATAD3AQ9NVI7 634 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 THAP1Q9NVV9 213 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 TAS2R9Q9NYW1 312 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 TAS2R7Q9NYW3 318 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 SH3BP4Q9P0V3 963 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 MAPRE3Q9UPY8 281 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 NBASA2RRP1 2371 aa11.92□□□□□ -0.5
PHF1-210ENST00000488767 ASPDHA6ND91 283 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 SLCO1B7G3V0H7 640 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 KLF11O14901 512 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 AKAP10O43572 662 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 ITM2AO43736 263 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 LRATO95237 230 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 JUNP05412 331 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 BCKDHAP12694 445 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 GPX3P22352 226 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 KRT20P35900 424 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 UQCRFS1P47985 274 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 MRPS35P82673 323 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 PMP22Q01453 160 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 BST1Q10588 318 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 MRPL49Q13405 166 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 EXOSC7Q15024 291 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 ZNHIT3Q15649 155 aaPredicted RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 CEBPEQ15744 281 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 SMU1Q2TAY7 513 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.91□□□□□ -0.5
PHF1-210ENST00000488767 TRMT12Q53H54 448 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 ZNF628Q5EBL2 1059 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 SLC22A10Q63ZE4 541 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 FAM111BQ6SJ93 734 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 RGS9BPQ6ZS82 235 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 FAM47EQ6ZV65 393 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 MDGA2Q7Z553 956 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 SULF2Q8IWU5 870 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 LIX1Q8N485 282 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 FAM26EQ8N5C1 309 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 NATD1Q8N6N6 113 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 DYDC1Q8WWB3 177 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 KAT2AQ92830 837 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 GFM2Q969S9 779 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 LCORQ96JN0 433 aaPredicted RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 FRMD6Q96NE9 622 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 FAM173AQ9BQD7 235 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 DDX18Q9NVP1 670 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 NOP53Q9NZM5 478 aaKnown RBP11.91□□□□□ -0.5
PHF1-210ENST00000488767 CNIH4Q9P003 139 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 BAHCC1Q9P281 2608 aa11.91□□□□□ -0.5
PHF1-210ENST00000488767 TRPC5OSA6NMA1 111 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 MYO1GB0I1T2 1018 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 PLOD3O60568 738 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 TBX19O60806 448 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 AGFG2O95081 481 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 UNC5CO95185 931 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 CLPSP04118 112 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 IFI6P09912 130 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 FBXO45P0C2W1 286 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 CNR1P21554 472 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 TACR1P25103 407 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 MANFP55145 182 aaKnown RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 GPR85P60893 370 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 KCNJ2P63252 427 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 PLCXD2Q0VAA5 305 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 ZNF155Q12901 538 aaPredicted RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 RPS6KA2Q15349 733 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 EIF2S3LQ2VIR3 472 aaKnown RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 ZNF791Q3KP31 576 aaPredicted RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 TBCELQ5QJ74 424 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 C6orf136Q5SQH8 315 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 IL23RQ5VWK5 629 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 ZNF324BQ6AW86 544 aaPredicted RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 PAOXQ6QHF9 649 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 BNC2Q6ZN30 1099 aaPredicted RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 SLC22A16Q86VW1 577 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 CPSF7Q8N684 471 aaKnown RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 ZNF441Q8N8Z8 693 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 CLHC1Q8NHS4 586 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 CTHRC1Q96CG8 243 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 HSPBAP1Q96EW2 488 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 EGLN2Q96KS0 407 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 PPP1R36Q96LQ0 422 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 AMDHD1Q96NU7 426 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 SPENQ96T58 3664 aaKnown RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 C1orf50Q9BV19 199 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 ITPAQ9BY32 194 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 MANSC1Q9H8J5 431 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 BAIAP2L1Q9UHR4 511 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 ZNF639Q9UID6 485 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
PHF1-210ENST00000488767 NPFFR2Q9Y5X5 522 aa11.9□□□□□ -0.5
PHF1-210ENST00000488767 A0A087WV62 115 aa11.89□□□□□ -0.51
PHF1-210ENST00000488767 NPIPA5E9PKD4 350 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms