RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 IRAK4Q9NWZ3 460 aa18.9■□□□□ 0.62
ATP1A1-208ENST00000488733 SEC14L3Q9UDX4 400 aa18.9■□□□□ 0.62
ATP1A1-208ENST00000488733 MRPS33Q9Y291 106 aaKnown RBP18.9■□□□□ 0.62
ATP1A1-208ENST00000488733 SH3GLB1Q9Y371 365 aa18.9■□□□□ 0.62
ATP1A1-208ENST00000488733 PCDHGB5Q9Y5G0 923 aa18.9■□□□□ 0.62
ATP1A1-208ENST00000488733 PCDHGA5Q9Y5G8 931 aa18.9■□□□□ 0.62
ATP1A1-208ENST00000488733 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 A0A0A6YYC8 382 aaPredicted RBP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 PRAMEF27A3QJZ7 478 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 I3L1I5 382 aaPredicted RBP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 B4GAT1O43505 415 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 FGF17O60258 216 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 SMNDC1O75940 238 aaKnown RBP eCLIP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 DNAJB5O75953 348 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 IFNW1P05000 195 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 FESP07332 822 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 PRKACGP22612 351 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 AVPR1BP47901 424 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 KCNJ5P48544 419 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 ARL4DP49703 201 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 HSD11B2P80365 405 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 GRM7Q14831 915 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 DUSP7Q16829 419 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 ZNF628Q5EBL2 1059 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 ZC3H14Q6PJT7 736 aaKnown RBP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 TSEN54Q7Z6J9 526 aaKnown RBP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 ADAMTS15Q8TE58 950 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 GIMAP5Q96F15 307 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 C16orf58Q96GQ5 468 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 COL21A1Q96P44 957 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 YIPF4Q9BSR8 244 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 GTPBP2Q9BX10 602 aaKnown RBP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 TOR3AQ9H497 397 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 SMOC1Q9H4F8 434 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 SEMA5BQ9P283 1151 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 C19orf53Q9UNZ5 99 aaPredicted RBP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 ENPP4Q9Y6X5 453 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 PCDH15Q96QU1 1955 aa18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 ARID1BQ8NFD5 2236 aaPredicted RBP18.89■□□□□ 0.61
ATP1A1-208ENST00000488733 FAM227AF5H4B4 570 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 FOXS1O43638 330 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 LDB3O75112 727 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 H6PDO95479 791 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 GNAO1P09471 354 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 MYF5P13349 255 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 PNLIPP16233 465 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 RHCEP18577 417 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 RRM2P31350 389 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 OR1E2P47887 323 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 ZIK1Q3SY52 487 aaPredicted RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 MFSD12Q6NUT3 480 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 CDC73Q6P1J9 531 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 WDR74Q6RFH5 385 aaPredicted RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 KMT5CQ86Y97 462 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 TMEM52Q8NDY8 209 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 ZNF675Q8TD23 568 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 TRNT1Q96Q11 434 aaKnown RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 GIN1Q9NXP7 522 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 PDP1Q9P0J1 537 aaPredicted RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 MYRFQ9Y2G1 1151 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 GPR179Q6PRD1 2367 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 TNFRSF11BO00300 401 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 PLOD3O60568 738 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 SLC35E2P0CK97 266 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 CDH2P19022 906 aaPredicted RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 TNFRSF1BP20333 461 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 IGFBP5P24593 272 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 XCR1P46094 333 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 FAM214AQ32MH5 1076 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 GPAT3Q53EU6 434 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 ZNF595Q8IYB9 648 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 ANKRD9Q96BM1 317 aaPredicted RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 ZNF354BQ96LW1 612 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 PIP5K1AQ99755 562 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 AMBRA1Q9C0C7 1298 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 EQTNQ9NQ60 294 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 FAM118AQ9NWS6 357 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 KLHL3Q9UH77 587 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 TMEFF2Q9UIK5 374 aaPredicted RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 ZNF318Q5VUA4 2279 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 MN1Q10571 1320 aaPredicted RBP18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 CACNA1HO95180 2353 aa18.88■□□□□ 0.61
ATP1A1-208ENST00000488733 DPPA5A6NC42 116 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 H0YIG0 161 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 SIGLEC6O43699 453 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 NT5EP21589 574 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 CD1CP29017 333 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 NR0B2Q15466 257 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 AMZ1Q400G9 498 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 KDM4DQ6B0I6 523 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 ZCCHC12Q6PEW1 402 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 APOBEC4Q8WW27 367 aaKnown RBP18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 RMND5BQ96G75 393 aaPredicted RBP18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 FBXL20Q96IG2 436 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 LYVE1Q9Y5Y7 322 aa18.87■□□□□ 0.61
ATP1A1-208ENST00000488733 PRAMEF25A6NGN4 478 aa18.86■□□□□ 0.61
ATP1A1-208ENST00000488733 H3BNH8 94 aa18.86■□□□□ 0.61
ATP1A1-208ENST00000488733 CLDN4O14493 209 aa18.86■□□□□ 0.61
ATP1A1-208ENST00000488733 KHNYNO15037 678 aaKnown RBP18.86■□□□□ 0.61
ATP1A1-208ENST00000488733 PCDHGA12O60330 932 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms