RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 QSOX2Q6ZRP7 698 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF572Q7Z3I7 529 aaPredicted RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 TBC1D1Q86TI0 1168 aaPredicted RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 RPS19BP1Q86WX3 136 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 GSPT2Q8IYD1 628 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 KRT78Q8N1N4 520 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 TCAIMQ8N3R3 496 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 CPSF7Q8N684 471 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 APCDD1LQ8NCL9 501 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 TRPV3Q8NET8 790 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 M1APQ8TC57 530 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 Q8TCH9 128 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ELP5Q8TE02 316 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF473Q8WTR7 871 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ANKRD7Q92527 254 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 MTFMTQ96DP5 389 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 PTCD3Q96EY7 689 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF354BQ96LW1 612 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 C8orf49Q96NF6 230 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 MAPKAP1Q9BPZ7 522 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 UTP23Q9BRU9 249 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 MS4A8Q9BY19 250 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 COPS7BQ9H9Q2 264 aaPredicted RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 GPRC5BQ9NZH0 403 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 NUDT4Q9NZJ9 180 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 LRFN1Q9P244 771 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 SEC14L3Q9UDX4 400 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 TINAGQ9UJW2 476 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 FBXW2Q9UKT8 454 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 DAPP1Q9UN19 280 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 NPIPA1Q9UND3 350 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 USP9XQ93008 2570 aaPredicted RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 MYO7BQ6PIF6 2116 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 CACNA1DQ01668 2161 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 A0A0G2JMM0 328 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 A0A1W2PPB8 328 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 A0A1W2PRS3 328 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 A0A1W2PS29 197 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 PINLYPA6NC86 204 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 WIPF3A6NGB9 483 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 URADA6NGE7 173 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 KIR3DP1A8MWS1 328 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 FOXO6A8MYZ6 492 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 WWP2O00308 870 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 CYR61O00622 381 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 PPP6CO00743 305 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 PCDH17O14917 1159 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF354AO60765 605 aaPredicted RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 SLC25A12O75746 678 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 ETHE1O95571 254 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 GBAP04062 536 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 IFNA16P05015 189 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 SP1P08047 785 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 GSTA2P09210 222 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 VSIG10L2P0DP72 767 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 GFAPP14136 432 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 TSPAN8P19075 237 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 ATP5A1P25705 553 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 EEF1DP29692 281 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 PTGER1P34995 402 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 GGT5P36269 586 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 DCTP40126 519 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 ARL1P40616 181 aaPredicted RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 BUD31P41223 144 aaPredicted RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 MTTPP55157 894 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 HNRNPH2P55795 449 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 MLF1P58340 268 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 TAS2R50P59544 299 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 RPS13P62277 151 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 CAV1Q03135 178 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 FOXL1Q12952 345 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 CDSNQ15517 529 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 C3AR1Q16581 482 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 ADPRMQ3LIE5 342 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 C18orf63Q68DL7 685 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 SLC25A25Q6KCM7 469 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 RPUSD3Q6P087 351 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 MED27Q6P2C8 311 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 LRRC70Q7Z2Q7 622 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 MDGA2Q7Z553 956 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 GOLGA7Q7Z5G4 137 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 SLC5A8Q8N695 610 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 OR2L5Q8NG80 312 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 HUS1BQ8NHY5 278 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 SUN3Q8TAQ9 357 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 STAG3L4Q8TBR4 150 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 PPWD1Q96BP3 646 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 PHF21BQ96EK2 531 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 WDR34Q96EX3 536 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 SCMH1Q96GD3 660 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 GPR78Q96P69 363 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 SERINC2Q96SA4 455 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 PAFAH2Q99487 392 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 MTERF1Q99551 399 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 DEFB126Q9BYW3 111 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 FAM129AQ9BZQ8 928 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 OR8D2Q9GZM6 311 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 CNOT10Q9H9A5 744 aaKnown RBP5.48□□□□□ -1.53
CDHR3-213ENST00000488386 NMRAL1Q9HBL8 299 aa5.48□□□□□ -1.53
CDHR3-213ENST00000488386 COPG2Q9UBF2 871 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms