RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 THAP1Q9NVV9 213 aa14.79□□□□□ -0.04
ERGIC3-216ENST00000488384 ERVK-11Q9UQG0 969 aa14.79□□□□□ -0.04
ERGIC3-216ENST00000488384 COL12A1Q99715 3063 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 HMGB1P1B2RPK0 211 aaPredicted RBP14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 PDPK1O15530 556 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 TBX19O60806 448 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 VPS4BO75351 444 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 GNLYP22749 145 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 NTSP30990 170 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 MPIP34949 423 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 ASMTP46597 345 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 TDGF1P3P51864 188 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 NCBP2P52298 156 aaKnown RBP eCLIP14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 OCRLQ01968 901 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 SRSF11Q05519 484 aaKnown RBP14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 MRPL49Q13405 166 aaKnown RBP14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 MAPKAPK3Q16644 382 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 ZNF791Q3KP31 576 aaPredicted RBP14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 FHL5Q5TD97 284 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 ATG16L1Q676U5 607 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 RTL4Q6ZR62 310 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 TRIM42Q8IWZ5 723 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 SLC15A4Q8N697 577 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 GOLGA6L1Q8N7Z2 621 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 PSD4Q8NDX1 1056 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 C17orf47Q8NEP4 570 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 OR7G2Q8NG99 324 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 NR4A3Q92570 626 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 PPCDCQ96CD2 204 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 ERP27Q96DN0 273 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 SPACA9Q96E40 222 aaPredicted RBP14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 AMDHD1Q96NU7 426 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 ITPAQ9BY32 194 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 NUF2Q9BZD4 464 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 GLIPR2Q9H4G4 154 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 MANSC1Q9H8J5 431 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 ANKRA2Q9H9E1 313 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 BCAP29Q9UHQ4 241 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 VPS4AQ9UN37 437 aa14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 KLF13Q9Y2Y9 288 aaPredicted RBP14.78□□□□□ -0.04
ERGIC3-216ENST00000488384 USP9XQ93008 2570 aaPredicted RBP14.77□□□□□ -0.04
ERGIC3-216ENST00000488384 A0A0G2JMM0 328 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 A0A1W2PPB8 328 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 A0A1W2PRS3 328 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 KIR3DP1A8MWS1 328 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 KLF11O14901 512 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 SCAMP2O15127 329 aaKnown RBP14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 PLOD3O60568 738 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 FBXO45P0C2W1 286 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 PRPS2P11908 318 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 MST1P26927 711 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 MC3RP41968 323 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 EMDP50402 254 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 NR0B1P51843 470 aaKnown RBP14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 NNATQ16517 81 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 IL23RQ5VWK5 629 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 HLA-DQA1Q5Y7H0 255 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 CPSF7Q8N684 471 aaKnown RBP14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 GOLM1Q8NBJ4 401 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 TP53INP1Q96A56 240 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 CIDECQ96AQ7 238 aaPredicted RBP14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 NXF5Q9H1B4 397 aaKnown RBP14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 AKTIPQ9H8T0 292 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 MEAF6Q9HAF1 191 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 TIMMDC1Q9NPL8 285 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 DEPPQ9NTK1 212 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 ZNF446Q9NWS9 450 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 ASIC5Q9NY37 505 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 MARCOQ9UEW3 520 aaPredicted RBP14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 CFL2Q9Y281 166 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 MAST4O15021 2626 aa14.77□□□□□ -0.05
ERGIC3-216ENST00000488384 LRRK2Q5S007 2527 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 EXPH5Q8NEV8 1989 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 NME6O75414 186 aaPredicted RBP14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 CBX6O95503 412 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 CRYABP02511 175 aaKnown RBP14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 CCL3P10147 92 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 G6PDP11413 515 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 EDN3P14138 238 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 HPCAL1P37235 193 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 MEOX1P50221 254 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 GPR85P60893 370 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 EMX2Q04743 252 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 SMU1Q2TAY7 513 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 RNFT1Q5M7Z0 435 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 TMEM107Q6UX40 140 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 TMEM64Q6YI46 380 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 SULF2Q8IWU5 870 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 TAGAPQ8N103 731 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 FAM98AQ8NCA5 519 aaKnown RBP14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 ST6GALNAC3Q8NDV1 305 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 DNAJB8Q8NHS0 232 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 ZNF75CPQ92670 426 aaPredicted RBP14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 MTERF3Q96E29 417 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 SGCZQ96LD1 299 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 SH2D2AQ9NP31 389 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 RYDENQ9NUL5 291 aaKnown RBP14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 SH3BP4Q9P0V3 963 aa14.76□□□□□ -0.05
ERGIC3-216ENST00000488384 PRODH2Q9UF12 536 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms