RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 NFATC1O95644 943 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 GSTT2P0CG29 244 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 GSTT2BP0CG30 244 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 AZGP1P25311 298 aaKnown RBP16.93■□□□□ 0.3
VIM-206ENST00000487938 DUSP2Q05923 314 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 SLAMF1Q13291 335 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 KRR1Q13601 381 aaKnown RBP16.93■□□□□ 0.3
VIM-206ENST00000487938 SNAPC1Q16533 368 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 FLYWCH1Q4VC44 716 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 GPAT3Q53EU6 434 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 FAM26EQ8N5C1 309 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 FLCNQ8NFG4 579 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 OR8K5Q8NH50 307 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 SMG7Q92540 1137 aaKnown RBP16.93■□□□□ 0.3
VIM-206ENST00000487938 SLC35B4Q969S0 331 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 ZNF582Q96NG8 517 aaPredicted RBP16.93■□□□□ 0.3
VIM-206ENST00000487938 PLA2G12AQ9BZM1 189 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 EGLN3Q9H6Z9 239 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 SIAEQ9HAT2 523 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 NDUFB11Q9NX14 153 aa16.93■□□□□ 0.3
VIM-206ENST00000487938 ZNF670-ZNF695F2Z2N8 137 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 RFXAPO00287 272 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 SCAMP1O15126 338 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 FRS3O43559 492 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 HMGN2P05204 90 aaKnown RBP16.92■□□□□ 0.3
VIM-206ENST00000487938 CLEC2LP0C7M8 214 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 ENDOUP21128 410 aaKnown RBP16.92■□□□□ 0.3
VIM-206ENST00000487938 PRDX1Q06830 199 aaKnown RBP16.92■□□□□ 0.3
VIM-206ENST00000487938 FUT5Q11128 374 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 C1DQ13901 141 aaKnown RBP16.92■□□□□ 0.3
VIM-206ENST00000487938 MLC1Q15049 377 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 BAK1Q16611 211 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 ATAT1Q5SQI0 421 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 LSRQ86X29 649 aaPredicted RBP16.92■□□□□ 0.3
VIM-206ENST00000487938 Q8N9G6 341 aaPredicted RBP16.92■□□□□ 0.3
VIM-206ENST00000487938 OR2A1Q8NGT9 310 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 NEDD4LQ96PU5 975 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 OR2A14Q96R47 310 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 CCDC32Q9BV29 185 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 HDAC8Q9BY41 377 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 POLDIP3Q9BY77 421 aaKnown RBP16.92■□□□□ 0.3
VIM-206ENST00000487938 TAS2R7Q9NYW3 318 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 ADAM29Q9UKF5 820 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 FBXW2Q9UKT8 454 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 KCNK6Q9Y257 313 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 SLC9A8Q9Y2E8 581 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 GPR52Q9Y2T5 361 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 ATG4BQ9Y4P1 393 aa16.92■□□□□ 0.3
VIM-206ENST00000487938 HYKKA2RU49 373 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 SMIM30A4D0T7 59 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 MAN2B1O00754 1011 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 DYRK3O43781 588 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 LGI1O95970 557 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 PAK4O96013 591 aaPredicted RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 BCL6P41182 706 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 TAS2R38P59533 333 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 MLLT1Q03111 559 aaPredicted RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 MAP4K2Q12851 820 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 MLLT11Q13015 90 aaPredicted RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 TMEM53Q6P2H8 277 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 TMPRSS11AQ6ZMR5 421 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 NRARPQ7Z6K4 114 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 KIF18BQ86Y91 864 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 SCAIQ8N9R8 606 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 MORN4Q8NDC4 146 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 OR9Q1Q8NGQ5 310 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 ZG16BQ96DA0 208 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 CAMK1GQ96NX5 476 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 HOXD1Q9GZZ0 328 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 TIGARQ9NQ88 270 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 YARS2Q9Y2Z4 477 aaKnown RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 V9GYH0 126 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 MN1Q10571 1320 aaPredicted RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 A0A1W2PR48 441 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 MID1O15344 667 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 ERI3O43414 337 aaKnown RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 CLEC3AO75596 197 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 RAB36O95755 333 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 DRD2P14416 443 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 NTSP30990 170 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 RCVRNP35243 200 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 DRD3P35462 400 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 ALDH6A1Q02252 535 aaKnown RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 COX10Q12887 443 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 SLC9A5Q14940 896 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 OR2G6Q5TZ20 316 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 C22orf42Q6IC83 251 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 C1orf94Q6P1W5 598 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 GDPGP1Q6ZNW5 385 aa16.91■□□□□ 0.3
VIM-206ENST00000487938 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 TRMT61BQ9BVS5 477 aaKnown RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 TXNL4BQ9NX01 149 aaKnown RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 TESQ9UGI8 421 aaKnown RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 SPIN1Q9Y657 262 aaPredicted RBP16.91■□□□□ 0.3
VIM-206ENST00000487938 PRR23AA6NEV1 266 aa16.9■□□□□ 0.3
VIM-206ENST00000487938 AP3D1O14617 1153 aa16.9■□□□□ 0.3
VIM-206ENST00000487938 KHKP50053 298 aa16.9■□□□□ 0.3
VIM-206ENST00000487938 CDK5Q00535 292 aa16.9■□□□□ 0.3
VIM-206ENST00000487938 RUNX1T1Q06455 604 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms