RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 MC3RP41968 323 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
CUX1-209ENST00000487284 NOVA1P51513 510 aaKnown RBP13.3□□□□□ -0.28
CUX1-209ENST00000487284 XKP51811 444 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 EMP3P54852 163 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 ITGA1P56199 1179 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 SELENOWP63302 87 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 KCNJ10P78508 379 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 TXNL4AP83876 142 aaKnown RBP13.3□□□□□ -0.28
CUX1-209ENST00000487284 MED21Q13503 144 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 GRM7Q14831 915 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 LTB4RQ15722 352 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 MAPK11Q15759 364 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 PRAMEF17Q5VTA0 474 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 GPR135Q8IZ08 494 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 TTC29Q8NA56 475 aaPredicted RBP13.3□□□□□ -0.28
CUX1-209ENST00000487284 TMEM52Q8NDY8 209 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 RAB8BQ92930 207 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 OSBPL11Q9BXB4 747 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 OR51I1Q9H343 314 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 APMAPQ9HDC9 416 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 CDV3Q9UKY7 258 aaKnown RBP13.3□□□□□ -0.28
CUX1-209ENST00000487284 FER1L5A0AVI2 2057 aa13.3□□□□□ -0.28
CUX1-209ENST00000487284 HYKKA2RU49 373 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 M0QX08 132 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 EI24O14681 340 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 CHST10O43529 356 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 NSA2O95478 260 aaKnown RBP13.29□□□□□ -0.28
CUX1-209ENST00000487284 IFNA14P01570 189 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 HMGN2P05204 90 aaKnown RBP13.29□□□□□ -0.28
CUX1-209ENST00000487284 FABP3P05413 133 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 BCHEP06276 602 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 IFI6P09912 130 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 CDK4P11802 303 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 CCL4P13236 92 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 PORP16435 677 aaPredicted RBP13.29□□□□□ -0.28
CUX1-209ENST00000487284 MATN1P21941 496 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 CLCN2P51788 898 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 VLDLRP98155 873 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 IQCCQ4KMZ1 466 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 SZRD1Q7Z422 152 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 SVOPLQ8N434 492 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 MARVELD2Q8N4S9 558 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 TANKQ92844 425 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 RNF31Q96EP0 1072 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 TMEM19Q96HH6 336 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 TPD52L3Q96J77 140 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 C7orf34Q96L11 122 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 STRADBQ9C0K7 418 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 CLK4Q9HAZ1 481 aaKnown RBP13.29□□□□□ -0.28
CUX1-209ENST00000487284 P2RX2Q9UBL9 471 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 SERTAD3Q9UJW9 196 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 RARRES3Q9UL19 164 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 ABCG2Q9UNQ0 655 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 CLCA2Q9UQC9 943 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 KNTC1P50748 2209 aa13.29□□□□□ -0.28
CUX1-209ENST00000487284 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 C5orf58C9J3I9 102 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 PLOD2O00469 737 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 DLGAP1O14490 977 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 FGF17O60258 216 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 DPM1O60762 260 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 PGM3O95394 542 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 GPR75O95800 540 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 OPN1SWP03999 348 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 ATP1B1P05026 303 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR12D1P0DN82 309 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 RNH1P13489 461 aaKnown RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 GCGRP47871 477 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR2T5Q6IEZ7 315 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 TBPL2Q6SJ96 375 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 SHISA5Q8N114 240 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 LGI4Q8N135 537 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 NUP43Q8NFH3 380 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR2T29Q8NH02 315 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 ADAMTS18Q8TE60 1221 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 LZICQ8WZA0 190 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 DEPDC7Q96QD5 511 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 CMKLR1Q99788 373 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 CTRCQ99895 268 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 PADI2Q9Y2J8 665 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 SEC16AO15027 2179 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 PIEZO1Q92508 2521 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 PRAMEF27A3QJZ7 478 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 BLACEA4D250 179 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 FAM227AF5H4B4 570 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 TMX2-CTNND1H3BSU7 103 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 GNGT2O14610 69 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 ZNF749O43361 778 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 ASNA1O43681 348 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 PDE9AO76083 593 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 SLITRK5O94991 958 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 TIAF1O95411 115 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 HPRP00739 348 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 ITIH1P19827 911 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 MAN2A2P49641 1150 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms