RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 UNC50Q53HI1 259 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 TBCELQ5QJ74 424 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 FNDC7Q5VTL7 733 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 DESI1Q6ICB0 168 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 SEM1Q6ZVN7 128 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 VWA5B2Q8N398 1253 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 C1orf52Q8N6N3 182 aaKnown RBP22.49■■□□□ 1.19
LIME1-206ENST00000487026 CDYL2Q8N8U2 506 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 BRF2Q9HAW0 419 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 MAT2BQ9NZL9 334 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 TRPS1Q9UHF7 1281 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 MANBAO00462 879 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 SUPT7LO94864 414 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 ABCB1P08183 1280 aaPredicted RBP22.48■■□□□ 1.19
LIME1-206ENST00000487026 ABCD3P28288 659 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 SOX18P35713 384 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 ALDH9A1P49189 494 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 WNT3P56703 355 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 MAP4K2Q12851 820 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 SNTB1Q13884 538 aaKnown RBP22.48■■□□□ 1.19
LIME1-206ENST00000487026 WDR53Q7Z5U6 358 aaPredicted RBP22.48■■□□□ 1.19
LIME1-206ENST00000487026 PACS2Q86VP3 889 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 CLYBLQ8N0X4 340 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 KLHL29Q96CT2 875 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 ZNF559Q9BR84 538 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 RYDENQ9NUL5 291 aaKnown RBP22.48■■□□□ 1.19
LIME1-206ENST00000487026 SLC6A5Q9Y345 797 aa22.48■■□□□ 1.19
LIME1-206ENST00000487026 GOLGA6L10A6NI86 522 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 DLX3O60479 287 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 SNX4O95219 450 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 CHN1P15882 459 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 KRT15P19012 456 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 CSNK2A2P19784 350 aaPredicted RBP22.47■■□□□ 1.19
LIME1-206ENST00000487026 MASP1P48740 699 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 TMED10P49755 219 aaKnown RBP22.47■■□□□ 1.19
LIME1-206ENST00000487026 MYBPHQ13203 477 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 LTB4RQ15722 352 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 TRMT12Q53H54 448 aaKnown RBP22.47■■□□□ 1.19
LIME1-206ENST00000487026 ZNF678Q5SXM1 525 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 RIPPLY2Q5TAB7 128 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 LGSNQ5TDP6 509 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 SECISBP2Q96T21 854 aaKnown RBP22.47■■□□□ 1.19
LIME1-206ENST00000487026 TIMP4Q99727 224 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 ITPAQ9BY32 194 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 NMRK1Q9NWW6 199 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 HEY2Q9UBP5 337 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 VPS29Q9UBQ0 182 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 HIVEP1P15822 2718 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 SPG11Q96JI7 2443 aa22.47■■□□□ 1.19
LIME1-206ENST00000487026 GNB5O14775 395 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 ATP1B1P05026 303 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 TAC1P20366 129 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 CDK9P50750 372 aaKnown RBP22.46■■□□□ 1.19
LIME1-206ENST00000487026 CRYZQ08257 329 aaKnown RBP22.46■■□□□ 1.19
LIME1-206ENST00000487026 TOMM20Q15388 145 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 TIFABQ6ZNK6 161 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 C17orf47Q8NEP4 570 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 CNRIP1Q96F85 164 aaPredicted RBP22.46■■□□□ 1.19
LIME1-206ENST00000487026 TMEM237Q96Q45 408 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 UBQLN3Q9H347 655 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 KCNN3Q9UGI6 736 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 ZNF639Q9UID6 485 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 PSME2Q9UL46 239 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 C15orf41Q9Y2V0 281 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 PCDHGB3Q9Y5G1 929 aa22.46■■□□□ 1.19
LIME1-206ENST00000487026 C2orf72A6NCS6 295 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 PPM1BO75688 479 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 CBX7O95931 251 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 HPNP05981 417 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 RPP38P78345 283 aaKnown RBP22.45■■□□□ 1.18
LIME1-206ENST00000487026 MRPS35P82673 323 aaKnown RBP22.45■■□□□ 1.18
LIME1-206ENST00000487026 SLC25A35Q3KQZ1 300 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 EIPR1Q53HC9 387 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 CES4AQ5XG92 561 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 TMEM200AQ86VY9 491 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 TNIP2Q8NFZ5 429 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 OR52R1Q8NGF1 315 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 ZNF681Q96N22 645 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 EHD3Q9NZN3 535 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 PLLPQ9Y342 182 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 ZNF780BQ9Y6R6 833 aa22.45■■□□□ 1.18
LIME1-206ENST00000487026 GOLGA8RI6L899 631 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 ESRRBO95718 433 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 KRT6AP02538 564 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 KRT6BP04259 564 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 ABHD2P08910 425 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 PCSK2P16519 638 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 KRT6CP48668 564 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 RASA2Q15283 850 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 TESK1Q15569 626 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 WIPI1Q5MNZ9 446 aaPredicted RBP22.44■■□□□ 1.18
LIME1-206ENST00000487026 GPRIN3Q6ZVF9 776 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 NAXEQ8NCW5 288 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 METTL6Q8TCB7 284 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 HGDQ93099 445 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 CTHRC1Q96CG8 243 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 OMA1Q96E52 524 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 LCORQ96JN0 433 aaPredicted RBP22.44■■□□□ 1.18
LIME1-206ENST00000487026 NODALQ96S42 347 aa22.44■■□□□ 1.18
LIME1-206ENST00000487026 FAIM2Q9BWQ8 316 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms