RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 UNC5DQ6UXZ4 953 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 LRRTM3Q86VH5 581 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF565Q8N9K5 539 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 NMNAT1Q9HAN9 279 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 GABRQQ9UN88 632 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 MUSKO15146 869 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 UGDHO60701 494 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 CCL5P13501 91 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 FXYD6P3P58550 94 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 RPS15AP62244 130 aaKnown RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 UAP1L1Q3KQV9 507 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 CDKL4Q5MAI5 379 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SCD5Q86SK9 330 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 TMPRSS12Q86WS5 348 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF584Q8IVC4 421 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SYNPOQ8N3V7 929 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 CNN2Q99439 309 aaKnown RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 MROQ9BYG7 248 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 MGAT4CQ9UBM8 478 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 RIMS3Q9UJD0 308 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 MYH1P12882 1939 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 C11orf98E9PRG8 122 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 ARSJQ5FYB0 599 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 PNPLA1Q8N8W4 532 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 GATSQ8NAP1 163 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SNIP1Q8TAD8 396 aaKnown RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM174Q8WUU8 243 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 FAM46AQ96IP4 442 aaKnown RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 ADAMTS5Q9UNA0 930 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 DHDHQ9UQ10 334 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM14AQ9Y6G1 99 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 GXYLT2A0PJZ3 443 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 TNFRSF10BO14763 440 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 FRKP42685 505 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 RAB11FIP2Q7L804 512 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 SSX6Q7RTT6 188 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 GDPD1Q8N9F7 314 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 Q8N9G6 341 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 SGTBQ96EQ0 304 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 MMABQ96EY8 250 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 BTNL2Q9UIR0 455 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 GPR37L1O60883 481 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 GNAO1P09471 354 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 UQCRC1P31930 480 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 CRYZQ08257 329 aaKnown RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 VEZF1Q14119 521 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 EIF4HQ15056 248 aaKnown RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 METTL2BQ6P1Q9 378 aaKnown RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM156Q8N614 296 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 ACOT13Q9NPJ3 140 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 KLHL21Q9UJP4 597 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 TIMM8BQ9Y5J9 83 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 JRKO75564 520 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 UPK1BO75841 260 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 PET100P0DJ07 73 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 ELAVL3Q14576 367 aaKnown RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 CPZQ66K79 652 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 CNTN4Q8IWV2 1026 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 GALNT11Q8NCW6 608 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 OR5T2Q8NGG2 359 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 MSANTD3Q96H12 275 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 BRF2Q9HAW0 419 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 VAPAQ9P0L0 249 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 SMCO3A2RU48 225 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 ARNTLO00327 626 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 SOX30O94993 753 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF865P0CJ78 1059 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-210ENST00000487017 PCGF2P35227 344 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 SPARTQ8N0X7 666 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 MS4A15Q8N5U1 240 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 OR9Q2Q8NGE9 314 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 RXFP3Q9NSD7 469 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 SERTAD3Q9UJW9 196 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 ACTL7AQ9Y615 435 aa15.66■□□□□ 0.1
COL7A1-210ENST00000487017 A0A1W2PPL8 197 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 C6P13671 934 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CD70P32970 193 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 IER5LQ5T953 404 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 IGFN1Q86VF2 1251 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 FAM217AQ8IXS0 508 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 GPR45Q9Y5Y3 372 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 WASH4PA8MWX3 477 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 EDN1P05305 212 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 GM2AP17900 193 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 DCP2Q8IU60 420 aaKnown RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 FIBINQ8TAL6 211 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF285Q96NJ3 590 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 POTEKPQ9BYX7 375 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 GORASP2Q9H8Y8 452 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 IL17CQ9P0M4 197 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 RABL2AQ9UBK7 228 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-210ENST00000487017 RABL2BQ9UNT1 228 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 C12orf71A8MTZ7 269 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 E2F3O00716 465 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 HSPA12AO43301 675 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 HCRTR2O43614 444 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 CLRN1P58418 232 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 LRRC37A5PQ49AS3 106 aa15.65■□□□□ 0.1
COL7A1-210ENST00000487017 BORAQ6PGQ7 559 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms