RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CPSF4O95639 269 aaKnown RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 IGKV3-11P04433 115 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 IFI6P09912 130 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 FAM87AP0C7U9 286 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 SFTPCP11686 197 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 IL12AP29459 219 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 CDK9P50750 372 aaKnown RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 GPR143P51810 404 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 DGKQP52824 942 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 SLC37A1P57057 533 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 ZNF155Q12901 538 aaPredicted RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 ZNHIT3Q15649 155 aaPredicted RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 MAPKAPK3Q16644 382 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 MPEG1Q2M385 716 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 FCRLBQ6BAA4 426 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 BHLHB9Q6PI77 547 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 LINC00696Q6ZRV3 163 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 MTERF4Q7Z6M4 381 aaKnown RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 ANKRD46Q86W74 232 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 RPS19BP1Q86WX3 136 aaKnown RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 LGI4Q8N135 537 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 TRIML2Q8N7C3 387 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 OR7G2Q8NG99 324 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 C9orf43Q8TAL5 461 aaPredicted RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 SLC22A8Q8TCC7 542 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 MOAP1Q96BY2 351 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 CTHRC1Q96CG8 243 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 ELP4Q96EB1 424 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 PANX1Q96RD7 426 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 CDCP1Q9H5V8 836 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 ZCCHC3Q9NUD5 404 aaKnown RBP10.58□□□□□ -0.72
NUP50-216ENST00000486184 TUBD1Q9UJT1 453 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 ZNF451Q9Y4E5 1061 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 PCDHGB7Q9Y5F8 929 aa10.58□□□□□ -0.72
NUP50-216ENST00000486184 EXPH5Q8NEV8 1989 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 DYTNA2CJ06 578 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 PLOD2O00469 737 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 EMC8O43402 210 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 CBX7O95931 251 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 PRKAG1P54619 331 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 NRG3P56975 720 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 DCAF7P61962 342 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ARG2P78540 354 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 MGAT2Q10469 447 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 MFAP5Q13361 173 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 TP53BP2Q13625 1128 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 EBPQ15125 230 aaKnown RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 MAPRE2Q15555 327 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 LINC00303Q3SY05 128 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ACER2Q5QJU3 275 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 C6orf10Q5SRN2 563 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 GKAP1Q5VSY0 366 aaPredicted RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 B3GNTL1Q67FW5 361 aaPredicted RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 TCTN3Q6NUS6 607 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 H3F3CQ6NXT2 135 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 MSANTD1Q6ZTZ1 278 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 C9orf40Q8IXQ3 194 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 CLECL1Q8IZS7 167 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 TAGAPQ8N103 731 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 OR2L13Q8N349 312 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ZADH2Q8N4Q0 377 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 TMEM156Q8N614 296 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 NUP43Q8NFH3 380 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 OR56A1Q8NGH5 318 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 C16orf52Q8NHV5 167 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 NUBPLQ8TB37 319 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 SFXN5Q8TD22 340 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 TTC9Q92623 222 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 SPDL1Q96EA4 605 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ITCHQ96J02 903 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 MS4A4EQ96PG1 132 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 CCT8L2Q96SF2 557 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 WWTR1Q9GZV5 400 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ZNF552Q9H707 407 aaPredicted RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 EQTNQ9NQ60 294 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 STMN3Q9NZ72 180 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ZNF639Q9UID6 485 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 BTNL2Q9UIR0 455 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 ZNF223Q9UK11 482 aaPredicted RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 VPS4AQ9UN37 437 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 C19orf53Q9UNZ5 99 aaPredicted RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 ARL2BPQ9Y2Y0 163 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 HEMK1Q9Y5R4 338 aaPredicted RBP10.57□□□□□ -0.72
NUP50-216ENST00000486184 CAPN7Q9Y6W3 813 aa10.57□□□□□ -0.72
NUP50-216ENST00000486184 RNF103-CHMP3A0A140T963 221 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 WWP2O00308 870 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 UPK1AO00322 258 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 RFXANKO14593 260 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ANGPT2O15123 496 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 DPM1O60762 260 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ITGA10O75578 1167 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 FAM107AO95990 144 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 KRT16P08779 473 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 S1PR1P21453 382 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 SOX11P35716 441 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 CHI3L1P36222 383 aaPredicted RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 CCT3P49368 545 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 PRIM2P49643 509 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms