RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CCDC177Q9NQR7 707 aaPredicted RBP9.06□□□□□ -0.96
SND1-213ENST00000486037 LANCL2Q9NS86 450 aa9.06□□□□□ -0.96
SND1-213ENST00000486037 ALKBH4Q9NXW9 302 aa9.06□□□□□ -0.96
SND1-213ENST00000486037 NPFFR2Q9Y5X5 522 aa9.06□□□□□ -0.96
SND1-213ENST00000486037 EML6Q6ZMW3 1958 aa9.06□□□□□ -0.96
SND1-213ENST00000486037 A0A1B0GVC2 190 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 SGK494L7N484 410 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 MANBAO00462 879 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 CLDN4O14493 209 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 FCHO1O14526 889 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 BCKDKO14874 412 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 HAT1O14929 419 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 DNAJB6O75190 326 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 DCTN3O75935 186 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 IGHG3P01860 377 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 LINC00032P0C843 101 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 BMP7P18075 431 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 IL1RNP18510 177 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 HMOX2P30519 316 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 HSD17B2P37059 387 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 MAGEA5P43359 124 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 NR1H2P55055 460 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 IRF8Q02556 426 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 RUNX1T1Q06455 604 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 PCDH1Q08174 1060 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 CHIT1Q13231 466 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 DOC2AQ14183 400 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 E2F2Q14209 437 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 NSDHLQ15738 373 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 GGTA1PQ4G0N0 100 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 XKR7Q5GH72 579 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 CATSPEREQ5SY80 951 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 LCTLQ6UWM7 567 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 SLCO4C1Q6ZQN7 724 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 PDSS2Q86YH6 399 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 CYP4Z2PQ8N1L4 340 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 TNIP2Q8NFZ5 429 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 OR2T11Q8NH01 316 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 ACTRT2Q8TDY3 377 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 SMPDL3AQ92484 453 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 CCT6BQ92526 530 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 NEIL2Q969S2 332 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 PIP5K1AQ99755 562 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 YIPF4Q9BSR8 244 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 TTTY12Q9BZ98 90 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 NMUR2Q9GZQ4 415 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 FARSBQ9NSD9 589 aaKnown RBP9.05□□□□□ -0.96
SND1-213ENST00000486037 GPRC5BQ9NZH0 403 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 SPRR3Q9UBC9 169 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 B4GALT7Q9UBV7 327 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 GIMAP2Q9UG22 337 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 DYRK1BQ9Y463 629 aa9.05□□□□□ -0.96
SND1-213ENST00000486037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.04□□□□□ -0.967e-8■■■■■ 27
SND1-213ENST00000486037 ATP6AP2A0A1C7CYW4 349 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 ZNF839A8K0R7 811 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 E9PBE3 544 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CLGNO14967 610 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 SIAH2O43255 324 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 UGDHO60701 494 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 WDR1O75083 606 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 RDH16O75452 317 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 ATP6AP2O75787 350 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 GLSO94925 669 aaPredicted RBP9.04□□□□□ -0.96
SND1-213ENST00000486037 UBOX5O94941 541 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CHEK2O96017 543 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CYC1P08574 325 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CCND1P24385 295 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CASP2P42575 452 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 AVPR1BP47901 424 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 AGFG1P52594 562 aaKnown RBP9.04□□□□□ -0.96
SND1-213ENST00000486037 OR4D2P58180 307 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 PLGLB1Q02325 96 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 FAM53BQ14153 422 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CPSF6Q16630 551 aaKnown RBP eCLIP9.04□□□□□ -0.96
SND1-213ENST00000486037 SPRED3Q2MJR0 410 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 XKR6Q5GH73 641 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 THEMIS2Q5TEJ8 643 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 LIPJQ5W064 366 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 NXNQ6DKJ4 435 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 ZNF425Q6IV72 752 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 NXPE4Q6UWF7 544 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 RNF165Q6ZSG1 346 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 Q6ZSR9 355 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 LARP4Q71RC2 724 aaKnown RBP eCLIP9.04□□□□□ -0.962e-6■■■■■ 32.5
SND1-213ENST00000486037 CLNKQ7Z7G1 428 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 TMPRSS11BQ86T26 416 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 MYLK4Q86YV6 388 aaPredicted RBP9.04□□□□□ -0.96
SND1-213ENST00000486037 DDIASQ8IXT1 998 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 RAB42Q8N4Z0 105 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 TMEM251Q8N6I4 163 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 PLPP5Q8NEB5 264 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 NFAM1Q8NET5 270 aaPredicted RBP9.04□□□□□ -0.96
SND1-213ENST00000486037 OR2M7Q8NG81 312 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 SLC5A11Q8WWX8 675 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 ERP27Q96DN0 273 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 WDR34Q96EX3 536 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 LRRC37BQ96QE4 947 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 HBEGFQ99075 208 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 RAB11FIP5Q9BXF6 653 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms