RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 UBFD1O14562 309 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 COPEO14579 308 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 ADAM10O14672 748 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TP53I11O14683 189 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TFECO14948 347 aaPredicted RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 ACOX3O15254 700 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 HS6ST1O60243 411 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 PLOD3O60568 738 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TBX19O60806 448 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TRIM13O60858 407 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 PRKRAO75569 313 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 RSL1D1O76021 490 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 SLITRK5O94991 958 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 SNX4O95219 450 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TUBBP07437 444 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 CT62P0C5K7 136 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 UROSP10746 265 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TSPAN8P19075 237 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 DRD5P21918 477 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 MPIP34949 423 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 PTGS2P35354 604 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 SERPINB5P36952 375 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 PPICP45877 212 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TMED10P49755 219 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 SMSP52788 366 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 PPIAP62937 165 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 RAE1P78406 368 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 ACSM2AQ08AH3 577 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 SNTA1Q13424 505 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 SLC10A1Q14973 349 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 KIAA0040Q15053 153 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 ZNF630Q2M218 657 aaPredicted RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 SGO1Q5FBB7 561 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 LIPMQ5VYY2 423 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 ACSM2BQ68CK6 577 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 NUP54Q7Z3B4 507 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 MRGPRGQ86SM5 289 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TRABD2AQ86V40 505 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 LRRC25Q8N386 305 aaPredicted RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 VWA5B2Q8N398 1253 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 FBXW8Q8N3Y1 598 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 FAM109AQ8N4B1 249 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 MREGQ8N565 214 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 BANPQ8N9N5 519 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 OR52N2Q8NGI0 321 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 AENQ8WTP8 325 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 C16orf78Q8WTQ4 265 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 CAVIN3Q969G5 261 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 CNRIP1Q96F85 164 aaPredicted RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 ZNF764Q96H86 408 aaPredicted RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 MAGED4Q96JG8 741 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 CNPPD1Q9BV87 410 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 ANGPTL4Q9BY76 406 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 TTTY12Q9BZ98 90 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 STMN4Q9H169 189 aaPredicted RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 MID1IP1Q9NPA3 183 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 ZFP64Q9NPA5 681 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 RRAGDQ9NQL2 400 aaPredicted RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 MAT2BQ9NZL9 334 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 CNOT11Q9UKZ1 510 aaKnown RBP6.45□□□□□ -1.38
VPS50-218ENST00000485994 DLGAP4Q9Y2H0 992 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 CCL27Q9Y4X3 112 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 ZNF780BQ9Y6R6 833 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 ARHGAP21Q5T5U3 1957 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 PCNX3Q9H6A9 2034 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 MPDZO75970 2070 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 A0A087WV62 115 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 A0A1B0GTH9 108 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 A0A1W2PS29 197 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 PINLYPA6NC86 204 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 MYO1GB0I1T2 1018 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 AQP7O14520 342 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 BCKDKO14874 412 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 TRIM3O75382 744 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 ERAL1O75616 437 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 SLU7O95391 586 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 CBX7O95931 251 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 ABCB1P08183 1280 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 ANXA4P09525 319 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 CCL3P10147 92 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 ESRRAP11474 423 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 CHN1P15882 459 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 ABOP16442 354 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 DDCP20711 480 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 SSTR4P31391 388 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 TIA1P31483 386 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS50-218ENST00000485994 PTGER1P34995 402 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 DCTP40126 519 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 EMDP50402 254 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 NR0B1P51843 470 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 NRG3P56975 720 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 VSNL1P62760 191 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 RPP38P78345 283 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 ADORA2A-AS1P86434 159 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 GXYLT1Q4G148 440 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 TRMT12Q53H54 448 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 EMC4Q5J8M3 183 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 CFAP157Q5JU67 520 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 C6orf163Q5TEZ5 329 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 HLA-DQA1Q5Y7H0 255 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms