RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 THOC1Q96FV9 657 aaKnown RBP10.97□□□□□ -0.65
HPS4-214ENST00000485842 MAGED4Q96JG8 741 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 C5orf34Q96MH7 638 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SIGLEC12Q96PQ1 595 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 OR52B2Q96RD2 323 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ITPAQ9BY32 194 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 HES7Q9BYE0 225 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 DPY30Q9C005 99 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 EPN3Q9H201 632 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 KLHL1Q9NR64 748 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ATAD3AQ9NVI7 634 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 AIG1Q9NVV5 245 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 HPF1Q9NWY4 346 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 LRFN1Q9P244 771 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 MAP10Q9P2G4 905 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ZNF639Q9UID6 485 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ERVK-11Q9UQG0 969 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 DTX4Q9Y2E6 619 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 BOD1L1Q8NFC6 3051 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 POLR3GO15318 223 aaPredicted RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 SUV39H1O43463 412 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 ZNF354AO60765 605 aaPredicted RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 NME6O75414 186 aaPredicted RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 OR6B1O95007 311 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 GPX3P22352 226 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 TRHRP34981 398 aaPredicted RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 CDK9P50750 372 aaKnown RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 NR0B1P51843 470 aaKnown RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 AQP5P55064 265 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 MANFP55145 182 aaKnown RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 MLLT10P55197 1068 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 ZNF155Q12901 538 aaPredicted RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 RPS6KA2Q15349 733 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 LSM12Q3MHD2 195 aaKnown RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 ZNF766Q5HY98 468 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 FHL5Q5TD97 284 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 EPGNQ6UW88 154 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 IL20RBQ6UXL0 311 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 TMEM64Q6YI46 380 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 RIMKLAQ8IXN7 391 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 HORMAD2Q8N7B1 307 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 CEP70Q8NHQ1 597 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 ACTRT2Q8TDY3 377 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 TMEM125Q96AQ2 219 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 ERP27Q96DN0 273 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 MAELQ96JY0 434 aaKnown RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 PRPF18Q99633 342 aaKnown RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 EBF4Q9BQW3 602 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 DUSP26Q9BV47 211 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 TCF7L2Q9NQB0 619 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 DDX18Q9NVP1 670 aaKnown RBP10.96□□□□□ -0.65
HPS4-214ENST00000485842 PRODH2Q9UF12 536 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 MAPRE3Q9UPY8 281 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 CFL2Q9Y281 166 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 PCDHGA10Q9Y5H3 936 aa10.96□□□□□ -0.65
HPS4-214ENST00000485842 KALRNO60229 2985 aa10.96□□□□□ -0.66
HPS4-214ENST00000485842 A0A1W2PRB8 838 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 C9JVG2 144 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 E9PBE3 544 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 UBDO15205 165 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 PLOD3O60568 738 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 EDF1O60869 148 aaKnown RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 COQ9O75208 318 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 SLC25A12O75746 678 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 BCAS2O75934 225 aaPredicted RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 NEURL1O76050 574 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 SLITRK5O94991 958 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 NADKO95544 446 aaPredicted RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 CD46P15529 392 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 IDH3AP50213 366 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 EMDP50402 254 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 CLNS1AP54105 237 aaKnown RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 C21orf58P58505 322 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 PIGGQ5H8A4 983 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 OR4F3Q6IEY1 312 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 OPN5Q6U736 354 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 PRR22Q8IZ63 422 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 TAGAPQ8N103 731 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 CISD2Q8N5K1 135 aaKnown RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 ZNF441Q8N8Z8 693 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 TMEM178AQ8NBL3 297 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 ELP4Q96EB1 424 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 TRIM4Q9C037 500 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 BHLHE41Q9C0J9 482 aaPredicted RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 NXF5Q9H1B4 397 aaKnown RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 FOLH1BQ9HBA9 442 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 NPHS2Q9NP85 383 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 EQTNQ9NQ60 294 aa10.95□□□□□ -0.66
HPS4-214ENST00000485842 ACSS1Q9NUB1 689 aaPredicted RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 C19orf53Q9UNZ5 99 aaPredicted RBP10.95□□□□□ -0.66
HPS4-214ENST00000485842 A0A087WV62 115 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 UPK1AO00322 258 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 PLOD2O00469 737 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 ANKRD28O15084 1053 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 CFLARO15519 480 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 ERN1O75460 977 aaKnown RBP10.94□□□□□ -0.66
HPS4-214ENST00000485842 TGDSO95455 350 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 C6orf47O95873 294 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 ABCB1P08183 1280 aaPredicted RBP10.94□□□□□ -0.66
HPS4-214ENST00000485842 VIMP08670 466 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms