RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ZNF615Q8N8J6 731 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 NUP43Q8NFH3 380 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 OR52R1Q8NGF1 315 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 OR56A1Q8NGH5 318 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 OR5AK3PQ8NH89 298 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 NCLNQ969V3 563 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 ROPN1LQ96C74 230 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 SLC35A5Q9BS91 424 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 OR10A5Q9H207 317 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 ZNF160Q9HCG1 818 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 ZCCHC3Q9NUD5 404 aaKnown RBP16.36■□□□□ 0.21
CHMP3-207ENST00000485465 SLC25A37Q9NYZ2 338 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 VAPAQ9P0L0 249 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 COPS7AQ9UBW8 275 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 BCAP29Q9UHQ4 241 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 COQ9O75208 318 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 PSMG1O95456 288 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 PRKAR1AP10644 381 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 CHI3L1P36222 383 aaPredicted RBP16.35■□□□□ 0.21
CHMP3-207ENST00000485465 NUDT2P50583 147 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 PRKAG1P54619 331 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 SLC37A1P57057 533 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 PLAG1Q6DJT9 500 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 BHLHB9Q6PI77 547 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 HACD2Q6Y1H2 254 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 SZRD1Q7Z422 152 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 C6orf120Q7Z4R8 191 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 APCDD1LQ8NCL9 501 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 M1APQ8TC57 530 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 ZFP90Q8TF47 636 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 THAP4Q8WY91 577 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 LRRC58Q96CX6 371 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 VMP1Q96GC9 406 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 DCBLD2Q96PD2 775 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 CGREF1Q99674 301 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 SEMA4CQ9C0C4 833 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 EPS8L2Q9H6S3 715 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.35■□□□□ 0.21
CHMP3-207ENST00000485465 RAXQ9Y2V3 346 aa16.35■□□□□ 0.21
CHMP3-207ENST00000485465 PCSK5Q92824 1860 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 FXYD1O00168 92 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 PRAMEF2O60811 474 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 C1QCP02747 245 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 ICAM2P13598 275 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 EMDP50402 254 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 CDC20Q12834 499 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 BNIP1Q12981 228 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 TP53BP2Q13625 1128 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 CAPRIN1Q14444 709 aaKnown RBP16.34■□□□□ 0.21
CHMP3-207ENST00000485465 BTBD16Q32M84 506 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 RUNDC3AQ59EK9 446 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 SAXO2Q658L1 398 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 RNF111Q6ZNA4 994 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 NEURL3Q96EH8 262 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 GIMAP5Q96F15 307 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 AURKBQ96GD4 344 aaPredicted RBP16.34■□□□□ 0.21
CHMP3-207ENST00000485465 ANKRD27Q96NW4 1050 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 MS4A4EQ96PG1 132 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 TPT1P8Q9HAU6 139 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 MMP25Q9NPA2 562 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHMP3-207ENST00000485465 PRODH2Q9UF12 536 aa16.34■□□□□ 0.21
CHMP3-207ENST00000485465 ZNF223Q9UK11 482 aaPredicted RBP16.34■□□□□ 0.21
CHMP3-207ENST00000485465 OR6C76A6NM76 312 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 B2RBV5 119 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 MASP2O00187 686 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 CLIC1O00299 241 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 NME6O75414 186 aaPredicted RBP16.33■□□□□ 0.2
CHMP3-207ENST00000485465 KRT75O95678 551 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 KRT16P08779 473 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 CLCN2P51788 898 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 DCAF10Q5QP82 559 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 BROXQ5VW32 411 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 LRRC69Q6ZNQ3 347 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 ZSCAN1Q8NBB4 408 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 C16orf52Q8NHV5 167 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 FBXO27Q8NI29 283 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 ELP5Q8TE02 316 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 FER1L6-AS2Q96M78 137 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 HOPXQ9BPY8 73 aaPredicted RBP16.33■□□□□ 0.2
CHMP3-207ENST00000485465 CPPED1Q9BRF8 314 aaPredicted RBP16.33■□□□□ 0.2
CHMP3-207ENST00000485465 SLC39A3Q9BRY0 314 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 GPATCH2Q9NW75 528 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 CFL2Q9Y281 166 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 HEMK1Q9Y5R4 338 aaPredicted RBP16.33■□□□□ 0.2
CHMP3-207ENST00000485465 GMEB1Q9Y692 573 aa16.33■□□□□ 0.2
CHMP3-207ENST00000485465 TRBV11-1A0A0K0K1C0 115 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 TAF4O00268 1085 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 UNC5CO95185 931 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 HMGN2P05204 90 aaKnown RBP16.32■□□□□ 0.2
CHMP3-207ENST00000485465 CELA2AP08217 269 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 PPIBP23284 216 aaKnown RBP16.32■□□□□ 0.2
CHMP3-207ENST00000485465 MXRA7P84157 204 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 TLE3Q04726 772 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 VAC14Q08AM6 782 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 Q0VFX4 171 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 FREM2Q5SZK8 3169 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 NANOGP8Q6NSW7 305 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 MFSD12Q6NUT3 480 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms