RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ADIPOR1Q96A54 375 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 C11orf24Q96F05 449 aaPredicted RBP11.31□□□□□ -0.6
MSH5-216ENST00000484309 JSRP1Q96MG2 331 aaPredicted RBP11.31□□□□□ -0.6
MSH5-216ENST00000484309 NXF5Q9H1B4 397 aaKnown RBP11.31□□□□□ -0.6
MSH5-216ENST00000484309 CENPHQ9H3R5 247 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 SH2D2AQ9NP31 389 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
MSH5-216ENST00000484309 ENTPD4Q9Y227 616 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 CHCHD2Q9Y6H1 151 aaPredicted RBP11.31□□□□□ -0.6
MSH5-216ENST00000484309 CENPEQ02224 2701 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 MED12Q93074 2177 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 ATP6AP2A0A1C7CYW4 349 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 H3BQF6 201 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 SEC22BO75396 215 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 ATP6AP2O75787 350 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
MSH5-216ENST00000484309 LINC00032P0C843 101 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 DRD2P14416 443 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 PTGS2P35354 604 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 MAP4K2Q12851 820 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 HEPACAMQ14CZ8 416 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 NTRK2Q16620 822 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.3□□□□□ -0.6
MSH5-216ENST00000484309 ZNF628Q5EBL2 1059 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 KANK2Q63ZY3 851 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 DESI1Q6ICB0 168 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 GALNT18Q6P9A2 607 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 Q6ZPB1 254 aaPredicted RBP11.3□□□□□ -0.6
MSH5-216ENST00000484309 TRIM46Q7Z4K8 759 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 CD163Q86VB7 1156 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 SLC22A16Q86VW1 577 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 DOLPP1Q86YN1 238 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 TICAM1Q8IUC6 712 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 FBXW8Q8N3Y1 598 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 OR7G1Q8NGA0 311 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 PAQR8Q8TEZ7 354 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
MSH5-216ENST00000484309 DIO2Q92813 273 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 GFM2Q969S9 779 aaKnown RBP11.3□□□□□ -0.6
MSH5-216ENST00000484309 PKNOX2Q96KN3 472 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 TUBB1Q9H4B7 451 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 PROK2Q9HC23 129 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 SLC35C2Q9NQQ7 365 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 GIMAP4Q9NUV9 329 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 SIRT5Q9NXA8 310 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 EHD3Q9NZN3 535 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 TNFRSF10DQ9UBN6 386 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 GIMAP2Q9UG22 337 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 ZNF639Q9UID6 485 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 RAB21Q9UL25 225 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 CCL27Q9Y4X3 112 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 NPFFR2Q9Y5X5 522 aa11.3□□□□□ -0.6
MSH5-216ENST00000484309 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.3□□□□□ -0.6
MSH5-216ENST00000484309 NUP214P35658 2090 aaPredicted RBP11.3□□□□□ -0.6
MSH5-216ENST00000484309 UNC79Q9P2D8 2635 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 WDR91A4D1P6 747 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 PRRG2O14669 202 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 RGS16O15492 202 aaPredicted RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 NPHS1O60500 1241 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 GLSO94925 669 aaPredicted RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 JUNP05412 331 aaKnown RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 DDCP20711 480 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 TACR1P25103 407 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 ARRB2P32121 409 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 NRG3P56975 720 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 RPL38P63173 70 aaKnown RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 FOXO1Q12778 655 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 RPS6KA2Q15349 733 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 GALNTL6Q49A17 601 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 ARL13AQ5H913 290 aaPredicted RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 CEP85LQ5SZL2 805 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 FAM71E1Q6IPT2 247 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 NOXRED1Q6NXP6 359 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 BNC2Q6ZN30 1099 aaPredicted RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 MRGPRGQ86SM5 289 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 DDIASQ8IXT1 998 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 FAM9CQ8IZT9 166 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 FAM109AQ8N4B1 249 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 CLHC1Q8NHS4 586 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 FAM57AQ8TBR7 257 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 TP53INP1Q96A56 240 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 CTHRC1Q96CG8 243 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 EGLN2Q96KS0 407 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 BBS4Q96RK4 519 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 TMEM109Q9BVC6 243 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 ZDHHC11Q9H8X9 412 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 LRTM1Q9HBL6 345 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 MYNNQ9NPC7 610 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 SENP1Q9P0U3 644 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 CNOT11Q9UKZ1 510 aaKnown RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 EXO1Q9UQ84 846 aaKnown RBP11.29□□□□□ -0.6
MSH5-216ENST00000484309 MEMO1Q9Y316 297 aa11.29□□□□□ -0.6
MSH5-216ENST00000484309 PCNX3Q9H6A9 2034 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms