RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 TMEM207Q6UWW9 146 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 SLC16A12Q6ZSM3 486 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 USP50Q70EL3 339 aaPredicted RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 ZNF367Q7RTV3 350 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 LRRC70Q7Z2Q7 622 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 SYVN1Q86TM6 617 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 ITIH5Q86UX2 942 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 IFNEQ86WN2 208 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 MMAAQ8IVH4 418 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 P3H2Q8IVL5 708 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 ZNF683Q8IZ20 524 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 OFCC1Q8IZS5 231 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 NATD1Q8N6N6 113 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 IL17RCQ8NAC3 791 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 LSM14AQ8ND56 463 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 DENND6BQ8NEG7 585 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 OR2T29Q8NH02 315 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 MCFD2Q8NI22 146 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 MCOLN3Q8TDD5 553 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 FAR1Q8WVX9 515 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 HMGB4Q8WW32 186 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 DDB2Q92466 427 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 GTF2H4Q92759 462 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 PROX1Q92786 737 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 TANKQ92844 425 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 CXorf40BQ96DE9 158 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 LGALS12Q96DT0 336 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 PABPC5Q96DU9 382 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 SPATA17Q96L03 361 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 ZNF300Q96RE9 604 aaPredicted RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 MBOAT4Q96T53 435 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 PARK7Q99497 189 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 SEPHS2Q99611 448 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 EPYCQ99645 322 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 SEMA3CQ99985 751 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 SLC39A3Q9BRY0 314 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 THUMPD3Q9BV44 507 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 GABARAPL3Q9BY60 117 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 DSN1Q9H410 356 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 CLMPQ9H6B4 373 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 IL1RL2Q9HB29 575 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 FBRSL1Q9HCM7 1045 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 IL1RAPQ9NPH3 570 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 CCDC177Q9NQR7 707 aaPredicted RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 DYRK4Q9NR20 520 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 TLR8Q9NR97 1041 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 LIN7CQ9NUP9 197 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 FAM120CQ9NX05 1096 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 CNOT2Q9NZN8 540 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 VSX1Q9NZR4 365 aaPredicted RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 MPP6Q9NZW5 540 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 PHF11Q9UIL8 331 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 NDRG4Q9ULP0 352 aaKnown RBP4.54□□□□□ -1.68
SSBP1-211ENST00000484178 SNX6Q9UNH7 406 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 CAMK2AQ9UQM7 478 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 TRAPPC4Q9Y296 219 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 TMEM5Q9Y2B1 443 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 PKP3Q9Y446 797 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 OARD1Q9Y530 152 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 ANGPTL3Q9Y5C1 460 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 GMPPBQ9Y5P6 360 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 WDR90Q96KV7 1748 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 PTPRFP10586 1907 aa4.54□□□□□ -1.68
SSBP1-211ENST00000484178 CITO14578 2027 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 TRBV5-3A0A0A0MS03 114 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 GXYLT2A0PJZ3 443 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 ASPDHA6ND91 283 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 ARL5CA6NH57 179 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 AGAP5A6NIR3 686 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 SLC38A8A6NNN8 435 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 EFCAB9A8MZ26 197 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 F5H5T6 163 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 I6L893 689 aaPredicted RBP4.53□□□□□ -1.68
SSBP1-211ENST00000484178 QSOX1O00391 747 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 HAT1O14929 419 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 STX7O15400 261 aaKnown RBP4.53□□□□□ -1.68
SSBP1-211ENST00000484178 MAGEB3O15480 346 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 INSIG1O15503 277 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 SEPT4O43236 478 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 KDELR3O43731 214 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 SEC22BO75396 215 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 CLDN11O75508 207 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 RFPL2O75678 378 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 KRT75O95678 551 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 C9P02748 559 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 RPLP0P05388 317 aaKnown RBP4.53□□□□□ -1.68
SSBP1-211ENST00000484178 FABP3P05413 133 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 C8GP07360 202 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 CLTBP09497 229 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 PIPP12273 146 aaPredicted RBP4.53□□□□□ -1.68
SSBP1-211ENST00000484178 CTPS1P17812 591 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 CD72P21854 359 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 PTBP1P26599 531 aaKnown RBP eCLIP4.53□□□□□ -1.686e-6■■□□□ 11.7
SSBP1-211ENST00000484178 ELK4P28324 431 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 SHMT2P34897 504 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 PTGER1P34995 402 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 IDUAP35475 653 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 ASMTP46597 345 aa4.53□□□□□ -1.68
SSBP1-211ENST00000484178 CSNK1DP48730 415 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms