RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 KCNJ16Q9NPI9 418 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-213ENST00000484112 C1orf109Q9NX04 203 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 TEX10Q9NXF1 929 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-213ENST00000484112 TAS2R7Q9NYW3 318 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 TNFRSF10DQ9UBN6 386 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 CES1P1Q9UKY3 287 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 RNF6Q9Y252 685 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 CFL2Q9Y281 166 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 YARS2Q9Y2Z4 477 aaKnown RBP9.25□□□□□ -0.93
CPSF4-213ENST00000484112 CCL27Q9Y4X3 112 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 HRH3Q9Y5N1 445 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF780BQ9Y6R6 833 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 CACNA1CQ13936 2221 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 HIVEP1P15822 2718 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 ADGRG4Q8IZF6 3080 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 TRBV11-1A0A0K0K1C0 115 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 TMEM120BA0PK00 339 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 A8MUA0 341 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 KLRC4-KLRK1H3BQV0 150 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 PGRMC2O15173 223 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 PEX1O43933 1283 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 BCAS2O75934 225 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 CHRNGP07510 517 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 ANXA4P09525 319 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 IFI6P09912 130 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 CPMP14384 443 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 PORP16435 677 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 DDCP20711 480 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 MAPK1P28482 360 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 CHRNB4P30926 498 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 DNAJA1P31689 397 aaKnown RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 HLCSP50747 726 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 XKP51811 444 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 IST1P53990 364 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 GPR85P60893 370 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 ABCE1P61221 599 aaKnown RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 RNF4P78317 190 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 RAE1P78406 368 aaKnown RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 KIAA0040Q15053 153 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 MPEG1Q2M385 716 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 SMU1Q2TAY7 513 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 UGT3A2Q3SY77 523 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 SH2D4BQ5SQS7 431 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 HHATQ5VTY9 493 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 CES4AQ5XG92 561 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 CLEC6AQ6EIG7 209 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 NOXRED1Q6NXP6 359 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF227Q86WZ6 799 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 CCDC71Q8IV32 467 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 GALNT12Q8IXK2 581 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 RPRMLQ8N4K4 120 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 SLC15A4Q8N697 577 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 GOLGA6L1Q8N7Z2 621 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 C17orf47Q8NEP4 570 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 LILRB4Q8NHJ6 448 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF721Q8TF20 911 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 C16orf78Q8WTQ4 265 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 TWIST2Q8WVJ9 160 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 SENP5Q96HI0 755 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 FCRL1Q96LA6 429 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 PPP3R2Q96LZ3 170 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 OR8D2Q9GZM6 311 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 DEFB127Q9H1M4 99 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 CXorf21Q9HAI6 301 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 LRTM1Q9HBL6 345 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 MYNNQ9NPC7 610 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 GIMAP4Q9NUV9 329 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 NKIRAS1Q9NYS0 192 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 MYOTQ9UBF9 498 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 HAO1Q9UJM8 370 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF223Q9UK11 482 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 DLGAP4Q9Y2H0 992 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 KLF13Q9Y2Y9 288 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-213ENST00000484112 RAP2CQ9Y3L5 183 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 AKAP9Q99996 3911 aa9.24□□□□□ -0.93
CPSF4-213ENST00000484112 ZFHX3Q15911 3703 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 GTF3C1Q12789 2109 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 LSM1O15116 133 aaKnown RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 TBX19O60806 448 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 SEC22BO75396 215 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 TOXO94900 526 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 HSPA4LO95757 839 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 IL3P08700 152 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 CHN1P15882 459 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 SERPINB3P29508 390 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MPIP34949 423 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 RPL3P39023 403 aaKnown RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 ASMTP46597 345 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 SSR4P51571 173 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MAGOHP61326 146 aaKnown RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 PMPCAQ10713 525 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 FUT7Q11130 342 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MAP4K2Q12851 820 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MAD2L1Q13257 205 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 CHI3L2Q15782 390 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 XKR7Q5GH72 579 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 ATG16L1Q676U5 607 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms