RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 CEPT1Q9Y6K0 416 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 H3BMH7 237 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 SLC28A2O43868 658 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 PLOD3O60568 738 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 E2F6O75461 281 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 NR2F1P10589 423 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 MAN2A2P49641 1150 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 LTB4RQ15722 352 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 TMEM71Q6P5X7 295 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 STK32CQ86UX6 486 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 KRT73Q86Y46 540 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 OR4N5Q8IXE1 308 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 TMEM52Q8NDY8 209 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 COL26A1Q96A83 441 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 RBM4BQ9BQ04 359 aaKnown RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 RBM4Q9BWF3 364 aaKnown RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 BTBD2Q9BX70 525 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 CALML5Q9NZT1 146 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 C19orf53Q9UNZ5 99 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 MFN2O95140 757 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 SLC35E2P0CK97 266 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 EPS8Q12929 822 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 YOD1Q5VVQ6 348 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 TTC33Q6PID6 262 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 MED25Q71SY5 747 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 ALDH16A1Q8IZ83 802 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 OR7G2Q8NG99 324 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 SPPL2AQ8TCT8 520 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 KAT2AQ92830 837 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 ANKRD9Q96BM1 317 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 DPYSL5Q9BPU6 564 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 TREX2Q9BQ50 279 aaPredicted RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 ZNF768Q9H5H4 540 aaKnown RBP24.6■■□□□ 1.53
SHOX2-204ENST00000483851 PTTG2Q9NZH5 202 aa24.6■■□□□ 1.53
SHOX2-204ENST00000483851 SIGLEC6O43699 453 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 LDB3O75112 727 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 OR2B3O76000 313 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 MED26O95402 600 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 CLIC3O95833 236 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 OPN1SWP03999 348 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 SYPP08247 313 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 DNAJA1P31689 397 aaKnown RBP24.59■■□□□ 1.53
SHOX2-204ENST00000483851 BIKQ13323 160 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 CDC73Q6P1J9 531 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 ZCCHC12Q6PEW1 402 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 ZNF786Q8N393 782 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 OR5D16Q8NGK9 328 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 OR7D2Q96RA2 312 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 SPRTNQ9H040 489 aaPredicted RBP24.59■■□□□ 1.53
SHOX2-204ENST00000483851 GABARAPL1Q9H0R8 117 aa24.59■■□□□ 1.53
SHOX2-204ENST00000483851 MAGED1Q9Y5V3 778 aaPredicted RBP24.59■■□□□ 1.53
SHOX2-204ENST00000483851 GPC6Q9Y625 555 aaPredicted RBP24.59■■□□□ 1.53
SHOX2-204ENST00000483851 LY6G6EA0A0G2JKS1 128 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 A0A0G2JPF8 293 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 HNRNPCL2B2RXH8 293 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 HNRNPCL3B7ZW38 293 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 FAM227AF5H4B4 570 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 hCG_2039718K7EN88 272 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 CLDN4O14493 209 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 CTNSO60931 367 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 HNRNPCL4P0DMR1 293 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 FPR1P21462 350 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 CDH15P55291 814 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 PPP2R2BQ00005 443 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 KCNC4Q03721 635 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 OTUD3Q5T2D3 398 aaPredicted RBP24.58■■□□□ 1.53
SHOX2-204ENST00000483851 FHL5Q5TD97 284 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 MFSD12Q6NUT3 480 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 BMP8AQ7Z5Y6 402 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 YTHDF1Q9BYJ9 559 aaKnown RBP24.58■■□□□ 1.53
SHOX2-204ENST00000483851 SOX17Q9H6I2 414 aaPredicted RBP24.58■■□□□ 1.53
SHOX2-204ENST00000483851 REEP1Q9H902 201 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 U3KQA8 63 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 ZDBF2Q9HCK1 2354 aa24.58■■□□□ 1.53
SHOX2-204ENST00000483851 A0A087WXM4 84 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 PRAMEF27A3QJZ7 478 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 ARHGAP33O14559 1287 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 ADAMDEC1O15204 470 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 PCDHGA12O60330 932 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 SOX30O94993 753 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 ANKRD34CP0C6C1 535 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 IGLV3-21P80748 117 aaPredicted RBP24.58■■□□□ 1.52
SHOX2-204ENST00000483851 SYPL1Q16563 259 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 ATAD3BQ5T9A4 648 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 SLC44A2Q8IWA5 706 aaPredicted RBP24.58■■□□□ 1.52
SHOX2-204ENST00000483851 NMD3Q96D46 503 aaKnown RBP24.58■■□□□ 1.52
SHOX2-204ENST00000483851 EPYCQ99645 322 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 EXD2Q9NVH0 621 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 NDUFAF4Q9P032 175 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 PCDHGB3Q9Y5G1 929 aa24.58■■□□□ 1.52
SHOX2-204ENST00000483851 PTGER1P34995 402 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 SEPHS1P49903 392 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 CLPPQ16740 277 aaPredicted RBP24.57■■□□□ 1.52
SHOX2-204ENST00000483851 PRICKLE4Q2TBC4 344 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 C7orf57Q8NEG2 295 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 ADAMTS15Q8TE58 950 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 CTHRC1Q96CG8 243 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 C16orf58Q96GQ5 468 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 TRNT1Q96Q11 434 aaKnown RBP24.57■■□□□ 1.52
SHOX2-204ENST00000483851 CUTCQ9NTM9 273 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms