RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 MAT2BQ9NZL9 334 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ZNF639Q9UID6 485 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ADAM29Q9UKF5 820 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 A8MT66 165 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 TP53I11O14683 189 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 GNB5O14775 395 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 SMIM24O75264 130 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 OR4F21O95013 312 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 EPPINO95925 133 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 GCAP28676 217 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 DNAJA1P31689 397 aaKnown RBP16.47■□□□□ 0.23
ATG4B-221ENST00000483778 CEACAM8P31997 349 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-221ENST00000483778 PTGDSP41222 190 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 MAPK12P53778 367 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 CKAP4Q07065 602 aaKnown RBP16.47■□□□□ 0.23
ATG4B-221ENST00000483778 MAP4K2Q12851 820 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 IFT88Q13099 833 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 LTB4RQ15722 352 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 ACSF3Q4G176 576 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-221ENST00000483778 TRMT12Q53H54 448 aaKnown RBP16.47■□□□□ 0.23
ATG4B-221ENST00000483778 WIPI1Q5MNZ9 446 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-221ENST00000483778 SLC48A1Q6P1K1 146 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 LIX1Q8N485 282 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 C16orf45Q96MC5 204 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-221ENST00000483778 NODALQ96S42 347 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 HEY2Q9UBP5 337 aa16.47■□□□□ 0.23
ATG4B-221ENST00000483778 NF1P21359 2839 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 SYT5O00445 386 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 ERAL1O75616 437 aaKnown RBP16.46■□□□□ 0.23
ATG4B-221ENST00000483778 CTAG2O75638 210 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 CBX7O95931 251 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 HPNP05981 417 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 CTAGE8P0CG41 777 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 COL6A2P12110 1019 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 BMP7P18075 431 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 HSD17B3P37058 310 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 AGFG1P52594 562 aaKnown RBP16.46■□□□□ 0.23
ATG4B-221ENST00000483778 IST1P53990 364 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 NAGLUP54802 743 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 SLC25A35Q3KQZ1 300 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 GGTA1PQ4G0N0 100 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 UNC50Q53HI1 259 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 VASNQ6EMK4 673 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 YRDCQ86U90 279 aaKnown RBP16.46■□□□□ 0.23
ATG4B-221ENST00000483778 CTAGE4Q8IX94 777 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 C1orf52Q8N6N3 182 aaKnown RBP16.46■□□□□ 0.23
ATG4B-221ENST00000483778 OR7G1Q8NGA0 311 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 TRPC4APQ8TEL6 797 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 HGDQ93099 445 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 CNRIP1Q96F85 164 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-221ENST00000483778 ZNF681Q96N22 645 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 SH3GL2Q99962 352 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 MRPL57Q9BQC6 102 aaKnown RBP16.46■□□□□ 0.23
ATG4B-221ENST00000483778 ITPAQ9BY32 194 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 BRINP2Q9C0B6 783 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 EPB41L4BQ9H329 900 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 ELOVL6Q9H5J4 265 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 AHSPQ9NZD4 102 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 EHD3Q9NZN3 535 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 MTRF1LQ9UGC7 380 aaKnown RBP16.46■□□□□ 0.23
ATG4B-221ENST00000483778 BCAP29Q9UHQ4 241 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 C15orf41Q9Y2V0 281 aa16.46■□□□□ 0.23
ATG4B-221ENST00000483778 CAPN14A8MX76 684 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 AHRRA9YTQ3 701 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 SNX4O95219 450 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 PCSK2P16519 638 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 BMP5P22003 454 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 PTPN6P29350 595 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 UQCRC1P31930 480 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 SERPINB9P50453 376 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 ZNF136P52737 540 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 ART1P52961 327 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 TSNAXIP1Q2TAA8 658 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 TBCELQ5QJ74 424 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 TEX35Q5T0J7 233 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 TIGD3Q6B0B8 471 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 PLXDC2Q6UX71 529 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 PAGE2Q7Z2X7 111 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 PACS2Q86VP3 889 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 VWA5B2Q8N398 1253 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 SELENOMQ8WWX9 145 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 CTHRC1Q96CG8 243 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 WDYHV1Q96HA8 205 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 C1QTNF3Q9BXJ4 246 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 UGT2B28Q9BY64 529 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 MRPL46Q9H2W6 279 aaKnown RBP16.45■□□□□ 0.22
ATG4B-221ENST00000483778 GALNT9Q9HCQ5 603 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 DNAJB12Q9NXW2 375 aaKnown RBP16.45■□□□□ 0.22
ATG4B-221ENST00000483778 CRIM1Q9NZV1 1036 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 TMEM216Q9P0N5 145 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 B4GALT7Q9UBV7 327 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 TMCO1Q9UM00 188 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 CAMK2AQ9UQM7 478 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 PCDHGB3Q9Y5G1 929 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 IKBKGQ9Y6K9 419 aa16.45■□□□□ 0.22
ATG4B-221ENST00000483778 C1orf226A1L170 272 aa16.44■□□□□ 0.22
ATG4B-221ENST00000483778 HSPB2A8KAH6 182 aa16.44■□□□□ 0.22
ATG4B-221ENST00000483778 MANBAO00462 879 aa16.44■□□□□ 0.22
ATG4B-221ENST00000483778 ICOSLGO75144 302 aa16.44■□□□□ 0.22
ATG4B-221ENST00000483778 UGT2B11O75310 529 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms