RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 IL5RAQ01344 420 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF628Q5EBL2 1059 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 BROXQ5VW32 411 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF770Q6IQ21 691 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 HEPHL1Q6MZM0 1159 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 MFSD12Q6NUT3 480 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CDC73Q6P1J9 531 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 FAM111BQ6SJ93 734 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 MCATQ8IVS2 390 aaKnown RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 UBALD2Q8IYN6 164 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 PHF10Q8WUB8 498 aaKnown RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 TANKQ92844 425 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 OTUB1Q96FW1 271 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 TCTN2Q96GX1 697 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ADNPQ9H2P0 1102 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 RLIMQ9NVW2 624 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CALML5Q9NZT1 146 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 GOLGA4Q13439 2230 aaKnown RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 SLC9B1P1A6NJY1 282 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 DUXAA6NLW8 204 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ABCB7O75027 752 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 GPR75O95800 540 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 EPPINO95925 133 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 LGI1O95970 557 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 AGR2O95994 175 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 FUT4P22083 530 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 TTKP33981 857 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CXCL12P48061 93 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 RAB38P57729 211 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 NUP107P57740 925 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 GANABQ14697 944 aaKnown RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 EXOSC6Q5RKV6 272 aaKnown RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 FHL5Q5TD97 284 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 KCTD8Q6ZWB6 473 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 GPR141Q7Z602 305 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CCDC71Q8IV32 467 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 OR4N5Q8IXE1 308 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 TMEFF1Q8IYR6 380 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 PARP8Q8N3A8 854 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 TMEM52Q8NDY8 209 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 OR5T3Q8NGG3 340 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF285Q96NJ3 590 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ALPK1Q96QP1 1244 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 SLC38A3Q99624 504 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 NIPSNAP1Q9BPW8 284 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 TUBA1CQ9BQE3 449 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 PINK1Q9BXM7 581 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CHRNA10Q9GZZ6 450 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 DUSP15Q9H1R2 295 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 SLC38A1Q9H2H9 487 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ANKRA2Q9H9E1 313 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 NMNAT1Q9HAN9 279 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 C19orf53Q9UNZ5 99 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 A0A087WV62 115 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 SYT5O00445 386 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 FGF17O60258 216 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 HTR1AP08908 422 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 EEF1B2P24534 225 aaKnown RBP12.41□□□□□ -0.42
CPNE1-225ENST00000483495 SHC2P98077 582 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-225ENST00000483495 FAM214AQ32MH5 1076 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 GPAT3Q53EU6 434 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 ATAD3BQ5T9A4 648 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 LACC1Q8IV20 430 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 OR9Q2Q8NGE9 314 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 CNIH3Q8TBE1 160 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 COL26A1Q96A83 441 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 SLC35A4Q96G79 324 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 MAP3K3Q99759 626 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 WFDC6Q9BQY6 131 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 FUZQ9BT04 418 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 IER2Q9BTL4 223 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 RAB33BQ9H082 229 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 POLR1BQ9H9Y6 1135 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 ANKHQ9HCJ1 492 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 EQTNQ9NQ60 294 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 STARD5Q9NSY2 213 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 PTTG2Q9NZH5 202 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 EPHA6Q9UF33 1036 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 SLC9A8Q9Y2E8 581 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 PCDHGA6Q9Y5G7 932 aa12.41□□□□□ -0.42
CPNE1-225ENST00000483495 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SGK494L7N484 410 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF701M0R085 212 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 AHCYL1O43865 530 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 PLOD3O60568 738 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 PIAS2O75928 621 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 OXSR1O95747 527 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ANGPTL1O95841 491 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 CTSBP07858 339 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 GABRA4P48169 554 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 CSNK1EP49674 416 aaKnown RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 EPHA4P54764 986 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SMIM11AP58511 58 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 DEFB110Q30KQ9 67 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms