RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ANXA8L1Q5VT79 327 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 AGAP7PQ5VUJ5 663 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 JMJD6Q6NYC1 403 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-224ENST00000483359 SLC29A4Q7RTT9 530 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 SLC5A8Q8N695 610 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 NATD1Q8N6N6 113 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 TTC9Q92623 222 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 AGAP4Q96P64 663 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 NPAS2Q99743 824 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 CDCP1Q9H5V8 836 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 ZBTB20Q9HC78 741 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-224ENST00000483359 NEUROD4Q9HD90 331 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 FAM120CQ9NX05 1096 aaKnown RBP16.55■□□□□ 0.24
CPNE1-224ENST00000483359 CCDC154A6NI56 674 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 MKRN2OSH3BPM6 223 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 WWP2O00308 870 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 PLOD3O60568 738 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 CEACAM4O75871 244 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 CAPN3P20807 821 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 SOX8P57073 446 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 MLC1Q15049 377 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 EBPQ15125 230 aaKnown RBP16.55■□□□□ 0.24
CPNE1-224ENST00000483359 SPDYE7PQ495Y7 208 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 WDR53Q7Z5U6 358 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-224ENST00000483359 MTDHQ86UE4 582 aaKnown RBP16.55■□□□□ 0.24
CPNE1-224ENST00000483359 OR7G1Q8NGA0 311 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 ABHD17AQ96GS6 310 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 PANX1Q96RD7 426 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 INPP5KQ9BT40 448 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 ITPAQ9BY32 194 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 ZCCHC3Q9NUD5 404 aaKnown RBP16.55■□□□□ 0.24
CPNE1-224ENST00000483359 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.55■□□□□ 0.248e-7■□□□□ 11.1
CPNE1-224ENST00000483359 TAS2R9Q9NYW1 312 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 PCDHGB4Q9UN71 923 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 ERVK-11Q9UQG0 969 aa16.55■□□□□ 0.24
CPNE1-224ENST00000483359 TNRC6AQ8NDV7 1962 aaKnown RBP16.54■□□□□ 0.24
CPNE1-224ENST00000483359 CACNA1BQ00975 2339 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 K7EM74 188 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 PLOD2O00469 737 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 FAM107AO95990 144 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 CDKN2CP42773 168 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 RHDQ02161 417 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 SLC2A7Q6PXP3 512 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 BLOC1S3Q6QNY0 202 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 PIGWQ7Z7B1 504 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 RPS19BP1Q86WX3 136 aaKnown RBP16.54■□□□□ 0.24
CPNE1-224ENST00000483359 OR2L13Q8N349 312 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 CPSF7Q8N684 471 aaKnown RBP16.54■□□□□ 0.24
CPNE1-224ENST00000483359 FBXO30Q8TB52 745 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 SPDL1Q96EA4 605 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 FAM120BQ96EK7 910 aaKnown RBP16.54■□□□□ 0.24
CPNE1-224ENST00000483359 WWTR1Q9GZV5 400 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 ANKRD10Q9NXR5 420 aa16.54■□□□□ 0.24
CPNE1-224ENST00000483359 C2orf92A0A1B0GVN3 265 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 TMEM200CA6NKL6 621 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 FCHO1O14526 889 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 SLITRK5O94991 958 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 PDGFAP04085 211 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 GSNP06396 782 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 EMDP50402 254 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 IRX1P78414 480 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-224ENST00000483359 ZNF155Q12901 538 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-224ENST00000483359 KCNAB2Q13303 367 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 TP53BP2Q13625 1128 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 MAPKAPK3Q16644 382 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 CRB2Q5IJ48 1285 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 ACER2Q5QJU3 275 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 C6orf10Q5SRN2 563 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 TEKT2Q9UIF3 430 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 C19orf53Q9UNZ5 99 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-224ENST00000483359 HEMK1Q9Y5R4 338 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-224ENST00000483359 A0A087WV62 115 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 ITGA10O75578 1167 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 OR2J2O76002 312 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 SOX11P35716 441 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 KLF10Q13118 480 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 GAB1Q13480 694 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 ABHD17BQ5VST6 288 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 HLA-DQA1Q5Y7H0 255 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 BEST3Q8N1M1 668 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 NUP43Q8NFH3 380 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 OTUB1Q96FW1 271 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-224ENST00000483359 CCDC115Q96NT0 180 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 ZNF71Q9NQZ8 489 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-224ENST00000483359 MYOTQ9UBF9 498 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 TP53TG5Q9Y2B4 290 aa16.53■□□□□ 0.24
CPNE1-224ENST00000483359 PIEZO2Q9H5I5 2752 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 NUP214P35658 2090 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-224ENST00000483359 RNF103-CHMP3A0A140T963 221 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 ASPDHA6ND91 283 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 OR6C76A6NM76 312 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 RFXANKO14593 260 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 COQ9O75208 318 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 ALPPP05187 535 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 CCT3P49368 545 aaKnown RBP16.52■□□□□ 0.24
CPNE1-224ENST00000483359 PRR5P85299 388 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 MEP1AQ16819 746 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 GKAP1Q5VSY0 366 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-224ENST00000483359 H3F3CQ6NXT2 135 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 ISLR2Q6UXK2 745 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms