RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TM9SF3Q9HD45 589 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 SLC25A37Q9NYZ2 338 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 TMEM9Q9P0T7 183 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 SPATA7Q9P0W8 599 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 ASH2LQ9UBL3 628 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 RSL24D1Q9UHA3 163 aaKnown RBP7.32□□□□□ -1.24
SNX13-208ENST00000482558 ATP6V1HQ9UI12 483 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 VPS4AQ9UN37 437 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 DLGAP4Q9Y2H0 992 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 HCFC2Q9Y5Z7 792 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 BPTFQ12830 3046 aa7.32□□□□□ -1.24
SNX13-208ENST00000482558 A0A1W2PQ09 198 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 FAM149AA5PLN7 773 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 CCDC160A6NGH7 325 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 DLGAP1O14490 977 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 KLK10O43240 276 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 NOL3O60936 208 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 UGT2B11O75310 529 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 GUCY1B2O75343 617 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 E2F6O75461 281 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 SEMA3DO95025 777 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 SLC16A8O95907 504 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ANXA4P09525 319 aaPredicted RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 SFTPCP11686 197 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 C6P13671 934 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 GSTM2P28161 218 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 PTPN6P29350 595 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 TIA1P31483 386 aaKnown RBP eCLIP7.31□□□□□ -1.24
SNX13-208ENST00000482558 MAGEA8P43361 318 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 HLCSP50747 726 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 CTSCP53634 463 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 NRG3P56975 720 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 NUP107P57740 925 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 CSNK2BP67870 215 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 SEMG2Q02383 582 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ZNF763Q0D2J5 394 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 FADDQ13158 208 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 GPM6BQ13491 265 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 CAMK1Q14012 370 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 SELPLGQ14242 412 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 DUSP6Q16828 381 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 VMACQ2NL98 169 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 PRICKLE4Q2TBC4 344 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 NAIF1Q69YI7 327 aaPredicted RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 MTFR2Q6P444 385 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ZC3H14Q6PJT7 736 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 EIF3MQ7L2H7 374 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 PAGE2Q7Z2X7 111 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ZER1Q7Z7L7 766 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 STK32CQ86UX6 486 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 FAM129CQ86XR2 697 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 FAM90A1Q86YD7 464 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 TRAPPC5Q8IUR0 188 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ERI1Q8IV48 349 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 DCUN1D3Q8IWE4 304 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 CFAP206Q8IYR0 622 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ZNF786Q8N393 782 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 VN1R2Q8NFZ6 395 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 IFI44Q8TCB0 444 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 SLC5A11Q8WWX8 675 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 PYCR2Q96C36 320 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 CHFRQ96EP1 664 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 SIPA1Q96FS4 1042 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 RAB11FIP5Q9BXF6 653 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 C1QTNF7Q9BXJ2 289 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 REXO4Q9GZR2 422 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 RBM38Q9H0Z9 239 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 ING2Q9H160 280 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 SLC25A18Q9H1K4 315 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 REEP4Q9H6H4 257 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 RMI1Q9H9A7 625 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 PELI2Q9HAT8 420 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 NTN4Q9HB63 628 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 IL1RAPQ9NPH3 570 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 FANCFQ9NPI8 374 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 THAP10Q9P2Z0 257 aaPredicted RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 ENOPH1Q9UHY7 261 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ACSL5Q9ULC5 683 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 WASF3Q9UPY6 502 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 NEUROG3Q9Y4Z2 214 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 PCNTO95613 3336 aa7.31□□□□□ -1.24
SNX13-208ENST00000482558 ZFC3H1O60293 1989 aaKnown RBP7.31□□□□□ -1.24
SNX13-208ENST00000482558 NOTCH4Q99466 2003 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 GNG14A0A1W2PPG7 69 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 TBC1D3BA6NDS4 549 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 A8MV72 311 aaPredicted RBP7.3□□□□□ -1.24
SNX13-208ENST00000482558 HEPACAM2A8MVW5 462 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 E7EQ34 232 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 PDLIM1O00151 329 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 UPK1AO00322 258 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 PCDH17O14917 1159 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 KMOO15229 486 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 TBX19O60806 448 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 SCN2BO60939 215 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 MTX2O75431 263 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 POP7O75817 140 aaKnown RBP7.3□□□□□ -1.24
SNX13-208ENST00000482558 KRT75O95678 551 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 SERPINA1P01009 418 aa7.3□□□□□ -1.24
SNX13-208ENST00000482558 ITGAMP11215 1152 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms