RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 C15orf38-AP3S2A0A0A6YYH1 394 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 OR14I1A6ND48 311 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 UBFD1O14562 309 aaKnown RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 BCKDKO14874 412 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 GLRA3O75311 464 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ULK1O75385 1050 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ATP1B1P05026 303 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 MYL2P10916 166 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 KRT15P19012 456 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 CSNK2A2P19784 350 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 IMPDH1P20839 514 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 S1PR1P21453 382 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ACVR2AP27037 513 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ABCD3P28288 659 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 PTGER4P35408 488 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 MASP1P48740 699 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 TMED10P49755 219 aaKnown RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 NRG3P56975 720 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 RAE1P78406 368 aaKnown RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ACSM2AQ08AH3 577 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 PLCXD2Q0VAA5 305 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 TOMM20Q15388 145 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 HYAL4Q2M3T9 481 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 TRMT12Q53H54 448 aaKnown RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ACSM2BQ68CK6 577 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 TMEM211Q6ICI0 200 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 MEX3BQ6ZN04 569 aaKnown RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 DND1Q8IYX4 353 aaKnown RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 LRRC25Q8N386 305 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-212ENST00000482251 LIX1Q8N485 282 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 CCDC63Q8NA47 563 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 MYRIPQ8NFW9 859 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 OR9A2Q8NGT5 310 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 SPPL2AQ8TCT8 520 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ACMSDQ8TDX5 336 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 CHTF18Q8WVB6 975 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 L3HYPDHQ96EM0 354 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 RUBCNLQ9H714 662 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 NMRK1Q9NWW6 199 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 CNIH4Q9P003 139 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 B4GALT7Q9UBV7 327 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 MCM8Q9UJA3 840 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 DLGAP4Q9Y2H0 992 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 ZNF780BQ9Y6R6 833 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 LRBAP50851 2863 aa9.61□□□□□ -0.87
CPSF4-212ENST00000482251 NINQ8N4C6 2090 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 PHF3Q92576 2039 aaKnown RBP9.6□□□□□ -0.87
CPSF4-212ENST00000482251 A0A1B0GVC2 190 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 C2orf72A6NCS6 295 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 ENO4A6NNW6 628 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 CAPN14A8MX76 684 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 G3V2L1 256 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 TP53I11O14683 189 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 GNB5O14775 395 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 CRCPO75575 148 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 TRAPPC6AO75865 159 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 CBX7O95931 251 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 PROCP04070 461 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 ENO1P06733 434 aaKnown RBP9.6□□□□□ -0.87
CPSF4-212ENST00000482251 GSTA1P08263 222 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 HSD3B1P14060 373 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 HSD3B2P26439 372 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 CHRNB4P30926 498 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 TIA1P31483 386 aaKnown RBP eCLIP9.6□□□□□ -0.87
CPSF4-212ENST00000482251 SOX18P35713 384 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 WNT3P56703 355 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 MGAT2Q10469 447 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 SPIN4Q56A73 249 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 SPDYAQ5MJ70 313 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 C1orf185Q5T7R7 199 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 WLSQ5T9L3 541 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 RTL6Q6ICC9 239 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 ZYG11AQ6WRX3 759 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 B3GNT6Q6ZMB0 384 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 LCA5Q86VQ0 697 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 CCDC116Q8IYX3 515 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 C4orf33Q8N1A6 199 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 OR7G1Q8NGA0 311 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 C16orf78Q8WTQ4 265 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 KAT2AQ92830 837 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 TP53INP1Q96A56 240 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 SARAFQ96BY9 339 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 OMA1Q96E52 524 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 GNRHR2Q96P88 292 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 TTYH2Q9BSA4 534 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 METTL7AQ9H8H3 244 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 GALNT9Q9HCQ5 603 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 TNFRSF12AQ9NP84 129 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 NPDC1Q9NQX5 325 aaPredicted RBP9.6□□□□□ -0.87
CPSF4-212ENST00000482251 FETUBQ9UGM5 382 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 STK38LQ9Y2H1 464 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 SLC6A5Q9Y345 797 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 FIS1Q9Y3D6 152 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 POLR3HQ9Y535 204 aaPredicted RBP9.6□□□□□ -0.87
CPSF4-212ENST00000482251 PTGDR2Q9Y5Y4 395 aa9.6□□□□□ -0.87
CPSF4-212ENST00000482251 A0A0G2JNJ9 132 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 KDM4EB2RXH2 506 aaPredicted RBP9.59□□□□□ -0.87
CPSF4-212ENST00000482251 SUSD5O60279 629 aa9.59□□□□□ -0.87
CPSF4-212ENST00000482251 HCN1O60741 890 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms