RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ACKR3P25106 362 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ITGA3P26006 1051 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 AVPR1AP37288 418 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CEACAM3P40198 252 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 MAGEA9P43362 315 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 KCNJ3P48549 501 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ZNF75DP51815 510 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 NDST1P52848 882 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 NUDT6P53370 316 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 PHEXP78562 749 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 GHRHRQ02643 423 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 MICBQ29980 383 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SOWAHAQ2M3V2 549 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 PLK5Q496M5 336 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SLC9C1Q4G0N8 1177 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SBK1Q52WX2 424 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 COQ5Q5HYK3 327 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CELF3Q5SZQ8 465 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 FAM46CQ5VWP2 391 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SUSD4Q5VX71 490 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ZNF425Q6IV72 752 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 KCNIP4Q6PIL6 250 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 PRSS57Q6UWY2 283 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SLC35D2Q76EJ3 337 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 HIST3H2AQ7L7L0 130 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 TBC1D26Q86UD7 250 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SLC22A16Q86VW1 577 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ANKRD46Q86W74 232 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 MICU2Q8IYU8 434 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ZNF683Q8IZ20 524 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 TBC1D19Q8N5T2 526 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 LRRC17Q8N6Y2 441 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ARL14EPQ8N8R7 260 aaPredicted RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 OR5T1Q8NG75 326 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 OR1L4Q8NGR5 311 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 NUDCD2Q8WVJ2 157 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 TCP11Q8WWU5 503 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 LHX4Q969G2 390 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 VOPP1Q96AW1 172 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 OTUB2Q96DC9 234 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 STAMBPL1Q96FJ0 436 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CENPKQ9BS16 269 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 WACQ9BTA9 647 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CADM1Q9BY67 442 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 DRC3Q9H069 523 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 OR51V1Q9H2C8 321 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CENPHQ9H3R5 247 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 UBTD1Q9HAC8 227 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 C12orf10Q9HB07 376 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CHMP1AQ9HD42 196 aaPredicted RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 MRPS30Q9NP92 439 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 TXLNGQ9NUQ3 528 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 POT1Q9NUX5 634 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 IMP3Q9NV31 184 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 ARL15Q9NXU5 204 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 WARS2Q9UGM6 360 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 PSORS1C1Q9UIG5 152 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 PITPNC1Q9UKF7 332 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CA5BQ9Y2D0 317 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 AP3M1Q9Y2T2 418 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 KPTNQ9Y664 436 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 STON1Q9Y6Q2 735 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CUX2O14529 1486 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 UTYO14607 1347 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 MAP3K15Q6ZN16 1313 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 CPED1A4D0V7 1026 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 FAM149AA5PLN7 773 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 TUBAL3A6NHL2 446 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 C2CD4BA6NLJ0 364 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SERPINE3A8MV23 424 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 ERVV-1B6SEH8 477 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 C9JVG2 144 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SIVA1O15304 175 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 RS1O15537 224 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 B4GALT5O43286 388 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 B4GAT1O43505 415 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SNAI2O43623 268 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SH3BGRLO75368 114 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 PSIP1O75475 530 aaKnown RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 ADAP1O75689 374 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 BCAR3O75815 825 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 RAB3DO95716 219 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 FABP1P07148 127 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 CSN3P07498 182 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 CTXN2P0C2S0 81 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 OR2T7P0C7T2 308 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 FCGR1AP12314 374 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 PSMA2P25787 234 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 DPP4P27487 766 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 PPP2R1BP30154 601 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 CHRNA5P30532 468 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 PTGER4P35408 488 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 TNFRSF4P43489 277 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 RGRP47804 291 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 CCR8P51685 355 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 IST1P53990 364 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms