RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CCDC51Q96ER9 411 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 FAM124BQ9H5Z6 455 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-210ENST00000482158 ADGRL4Q9HBW9 690 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 RCOR3Q9P2K3 495 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-210ENST00000482158 MLXQ9UH92 298 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 EMCNQ9ULC0 261 aa4.47□□□□□ -1.69
SF3B1-210ENST00000482158 MRPL11Q9Y3B7 192 aaKnown RBP4.47□□□□□ -1.69
SF3B1-210ENST00000482158 RNF103-CHMP3A0A140T963 221 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 K7ERI5 159 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 PHF1O43189 567 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-210ENST00000482158 MT-ATP6P00846 226 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 CSRP3P50461 194 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 NAAAQ02083 359 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 NHLRC3Q5JS37 347 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 FAM219BQ5XKK7 198 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 FBXL22Q6P050 247 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 ADAMTSL5Q6ZMM2 481 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 DPY19L2P2Q6ZN68 376 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 TMEM26Q6ZUK4 368 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 TMUB2Q71RG4 321 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 WBP1Q96G27 269 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 GPR174Q9BXC1 333 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.46□□□□□ -1.7
SF3B1-210ENST00000482158 CLIP2Q9UDT6 1046 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 SEC14L4Q9UDX3 406 aa4.46□□□□□ -1.7
SF3B1-210ENST00000482158 CYB561D2O14569 222 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 STK17BO94768 372 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 CCNA2P20248 432 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 HSPA1LP34931 641 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 SAA4P35542 130 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 HAND2P61296 217 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 BTG3Q14201 252 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-210ENST00000482158 CD226Q15762 336 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 SHROOM1Q2M3G4 852 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-210ENST00000482158 LRIT3Q3SXY7 679 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 REP15Q6BDI9 236 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 ATRAIDQ6UW56 229 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 LUZP1Q86V48 1076 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 PYROXD2Q8N2H3 581 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 MLKLQ8NB16 471 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 MINDY2Q8NBR6 621 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 TOMM40LQ969M1 308 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 C1orf147Q96MC9 270 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-210ENST00000482158 FOXN4Q96NZ1 517 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 FAM111AQ96PZ2 611 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 C19orf43Q9BQ61 176 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 NDUFAF3Q9BU61 184 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 RBM24Q9BX46 236 aaKnown RBP4.45□□□□□ -1.7
SF3B1-210ENST00000482158 PUS3Q9BZE2 481 aaKnown RBP4.45□□□□□ -1.7
SF3B1-210ENST00000482158 ALG9Q9H6U8 611 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 SOHLH2Q9NX45 425 aa4.45□□□□□ -1.7
SF3B1-210ENST00000482158 MCF2LO15068 1137 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 PRPSAP2O60256 369 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 PTBP3O95758 552 aaKnown RBP4.44□□□□□ -1.7
SF3B1-210ENST00000482158 ECDO95905 644 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-210ENST00000482158 IL10P22301 178 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 TMOD1P28289 359 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 MATKP42679 507 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 VCPP55072 806 aaKnown RBP4.44□□□□□ -1.7
SF3B1-210ENST00000482158 RAG2P55895 527 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 DSCR10P59022 87 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 BPIFB3P59826 476 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 MYBPC1Q00872 1141 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 ZNF85Q03923 595 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 PDIA5Q14554 519 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 ACSF3Q4G176 576 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-210ENST00000482158 SEL1L2Q5TEA6 688 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 TAF3Q5VWG9 929 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 CWC27Q6UX04 472 aaKnown RBP4.44□□□□□ -1.7
SF3B1-210ENST00000482158 OLFM4Q6UX06 510 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 RNF148Q8N7C7 305 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 CNNM3Q8NE01 707 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 OR6T1Q8NGN1 323 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 OR2L2Q8NH16 312 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 C1orf21Q9H246 121 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 MBD2Q9UBB5 411 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 ODF2LQ9ULJ1 636 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 PLA2G4CQ9UP65 541 aa4.44□□□□□ -1.7
SF3B1-210ENST00000482158 BUB1O43683 1085 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 RANBP6O60518 1105 aaKnown RBP4.43□□□□□ -1.7
SF3B1-210ENST00000482158 TOXO94900 526 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 IGHV3-9P01782 118 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 GP9P14770 177 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 FUT1P19526 365 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 MAPK3P27361 379 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-210ENST00000482158 CALML3P27482 149 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 PRDX2P32119 198 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 ELK3P41970 407 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 MAGEA4P43358 317 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 NME3Q13232 169 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 KARSQ15046 597 aaKnown RBP4.43□□□□□ -1.7
SF3B1-210ENST00000482158 C14orf28Q4W4Y0 310 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 ACER2Q5QJU3 275 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 IL23RQ5VWK5 629 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 CCBE1Q6UXH8 406 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-210ENST00000482158 ISLR2Q6UXK2 745 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 PRSS48Q7RTY5 328 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 OR4F17Q8NGA8 305 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 OR56B1Q8NGI3 324 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms