RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ANKDD1BA6NHY2 528 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PDCD5O14737 125 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 NUPL2O15504 423 aaKnown RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 GPR39O43194 453 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 EEF1E1O43324 174 aaKnown RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 CHST10O43529 356 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SIGLEC6O43699 453 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SSNA1O43805 119 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PRAF2O60831 178 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ZNF254O75437 659 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 APOL3O95236 402 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 F11P03951 625 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 HRGP04196 525 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 AOAHP28039 575 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 DGKEP52429 567 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PTPN5P54829 565 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 TSPAN5P62079 268 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SP140Q13342 867 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 NFATC2Q13469 925 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 MINDY4Q4G0A6 757 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 HECTD3Q5T447 861 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 METTL3Q86U44 580 aaKnown RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 MCATQ8IVS2 390 aaKnown RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 GPC2Q8N158 579 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 HASPINQ8TF76 798 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ST8SIA2Q92186 375 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 CXorf58Q96LI9 332 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 C12orf57Q99622 126 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 MARK1Q9P0L2 795 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 RHCGQ9UBD6 479 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PRKAG2Q9UGJ0 569 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 TRBV5-4A0A0C4DH59 114 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 PQLC2LA1A4F0 135 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 MTMR11A4FU01 709 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 F8W036 122 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 PRRG1O14668 218 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 LRRTM2O43300 516 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 OR10H3O60404 316 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 EFCAB14O75071 495 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 SOX30O94993 753 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 IGLV3-27P01718 113 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 APOC1P02654 83 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 LPLP06858 475 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 MMP3P08254 477 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 BLVRAP53004 296 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 LIM2P55344 173 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 SMIM11AP58511 58 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 POLR2GP62487 172 aaKnown RBP eCLIP10.08□□□□□ -0.8
SIK3-210ENST00000480468 PUM1Q14671 1186 aaKnown RBP eCLIP10.08□□□□□ -0.8
SIK3-210ENST00000480468 GRM7Q14831 915 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 GPR68Q15743 365 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 UPP1Q16831 310 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 SPDYE7PQ495Y7 208 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 TCTE1Q5JU00 501 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 LIPJQ5W064 366 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 SPATA2LQ8IUW3 424 aaPredicted RBP10.08□□□□□ -0.8
SIK3-210ENST00000480468 APOBEC3FQ8IUX4 373 aaKnown RBP10.08□□□□□ -0.8
SIK3-210ENST00000480468 NAXDQ8IW45 347 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 GPR135Q8IZ08 494 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 MOSPD2Q8NHP6 518 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 RPLP0P6Q8NHW5 317 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 RNFT2Q96EX2 444 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 FERD3LQ96RJ6 166 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 SLC35A5Q9BS91 424 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 FUZQ9BT04 418 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 DPH7Q9BTV6 452 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 BOCQ9BWV1 1114 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 SLC19A3Q9BZV2 496 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 FN3KQ9H479 309 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 METTL17Q9H7H0 456 aaPredicted RBP10.08□□□□□ -0.8
SIK3-210ENST00000480468 DNAJC11Q9NVH1 559 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 GULP1Q9UBP9 304 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 CLCA2Q9UQC9 943 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 MRPS7Q9Y2R9 242 aaKnown RBP10.08□□□□□ -0.8
SIK3-210ENST00000480468 PRSS21Q9Y6M0 314 aa10.08□□□□□ -0.8
SIK3-210ENST00000480468 ZNF593O00488 134 aaPredicted RBP10.07□□□□□ -0.8
SIK3-210ENST00000480468 KDELR3O43731 214 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 PRAMEF4O60810 478 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 ITGA10O75578 1167 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 H1F0P07305 194 aaKnown RBP10.07□□□□□ -0.8
SIK3-210ENST00000480468 RPL17P18621 184 aaKnown RBP10.07□□□□□ -0.8
SIK3-210ENST00000480468 GIFP27352 417 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 DSC1Q08554 894 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 ZXDCQ2QGD7 858 aaPredicted RBP10.07□□□□□ -0.8
SIK3-210ENST00000480468 MPP7Q5T2T1 576 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 PRAMEF9Q5VWM5 478 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 SLC22A10Q63ZE4 541 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 ANGPTL8Q6UXH0 198 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 ZNF852Q6ZMS4 543 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 SLITRK4Q8IW52 837 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 LRRC56Q8IYG6 542 aaPredicted RBP10.07□□□□□ -0.8
SIK3-210ENST00000480468 STPG2Q8N412 459 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 TOMM5Q8N4H5 51 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 CDC26Q8NHZ8 85 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 WDR20Q8TBZ3 569 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 RAET1EQ8TD07 263 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 POF1BQ8WVV4 589 aa10.07□□□□□ -0.8
SIK3-210ENST00000480468 MS4A3Q96HJ5 214 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms