RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 NPAS2Q99743 824 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 SLC35A5Q9BS91 424 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZCCHC3Q9NUD5 404 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 GID8Q9NWU2 228 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 P4HTMQ9NXG6 502 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 NDE1Q9NXR1 346 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 VAPAQ9P0L0 249 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 SLAMF8Q9P0V8 285 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 COPS7AQ9UBW8 275 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 ERVK-19Q9WJR5 959 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 CFL2Q9Y281 166 aa11.68□□□□□ -0.54
TRAPPC12-218ENST00000479897 NSG1A0A0A6YYJ2 146 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 IGHV3-20A0A0C4DH32 117 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 A8MUA0 341 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 HRKO00198 91 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 PEX12O00623 359 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 AIM2O14862 343 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 KLK10O43240 276 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 SEC24DO94855 1032 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 UNC5CO95185 931 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ANP32DO95626 131 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 WT1P19544 449 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 SSTR4P31391 388 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 EMDP50402 254 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 NUDT2P50583 147 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 PGDP52209 483 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 AP2B1P63010 937 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 CDC20Q12834 499 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 SRSF6Q13247 344 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ATP1A4Q13733 1029 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZNF267Q14586 743 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 GTDC1Q4AE62 458 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 RUNDC3AQ59EK9 446 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZCCHC12Q6PEW1 402 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 RNF111Q6ZNA4 994 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZNF621Q6ZSS3 439 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 SPACA3Q8IXA5 215 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 C17orf47Q8NEP4 570 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 NUP43Q8NFH3 380 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR8J3Q8NGG0 315 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 M1APQ8TC57 530 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ELP5Q8TE02 316 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 NCLNQ969V3 563 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 LRRC58Q96CX6 371 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ANKRD27Q96NW4 1050 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 CPPED1Q9BRF8 314 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 GPATCH1Q9BRR8 931 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 CNPPD1Q9BV87 410 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR8D2Q9GZM6 311 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR10A5Q9H207 317 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 C1orf21Q9H246 121 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 RAD21L1Q9H4I0 556 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 TPT1P8Q9HAU6 139 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 MMP25Q9NPA2 562 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 GPATCH2Q9NW75 528 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 PRODH2Q9UF12 536 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 ZNF223Q9UK11 482 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 FBXL4Q9UKA2 621 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 CORO2BQ9UQ03 480 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 SNX8Q9Y5X2 465 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 DOCK10Q96BY6 2186 aa11.67□□□□□ -0.54
TRAPPC12-218ENST00000479897 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 RRP8O43159 456 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 ATP5HO75947 161 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 KRT75O95678 551 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 GSNP06396 782 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 KRT16P08779 473 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 ICAM2P13598 275 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 CPOXP36551 454 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 MAP3K8P41279 467 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 CPA2P48052 419 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 MVDP53602 400 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 PSPHP78330 225 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 FADDQ13158 208 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 TP53BP2Q13625 1128 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 EXOSC7Q15024 291 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 EBPQ15125 230 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 SPDYE7PQ495Y7 208 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 DCAF10Q5QP82 559 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 MFSD12Q6NUT3 480 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 PROSER1Q86XN7 944 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 C9orf40Q8IXQ3 194 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 PGAM4Q8N0Y7 254 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 ARMC10Q8N2F6 343 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR52R1Q8NGF1 315 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR52N2Q8NGI0 321 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 OR5AK3PQ8NH89 298 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 C16orf52Q8NHV5 167 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 NUBPLQ8TB37 319 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 NAF1Q96HR8 494 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 SLC35G5Q96KT7 338 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 VSTM2LQ96N03 204 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 HOPXQ9BPY8 73 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 LMF2Q9BU23 707 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 NUDT9Q9BW91 350 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 GIN1Q9NXP7 522 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 ABCD2Q9UBJ2 740 aa11.66□□□□□ -0.54
TRAPPC12-218ENST00000479897 HEMK1Q9Y5R4 338 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms