RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 HRH3Q9Y5N1 445 aa13.84□□□□□ -0.19
PRKN-207ENST00000479615 NCOA6Q14686 2063 aaPredicted RBP13.84□□□□□ -0.19
PRKN-207ENST00000479615 GNG14A0A1W2PPG7 69 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 GOLGA8RI6L899 631 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 ZNHIT1O43257 154 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 PCDH7O60245 1069 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 TRIM3O75382 744 aaPredicted RBP13.83□□□□□ -0.2
PRKN-207ENST00000479615 SLITRK5O94991 958 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 CT62P0C5K7 136 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 PRF1P14222 555 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 DRD5P21918 477 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 GPX3P22352 226 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 ABCD3P28288 659 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 CRHR1P34998 444 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 FEN1P39748 380 aaKnown RBP13.83□□□□□ -0.2
PRKN-207ENST00000479615 ALDH9A1P49189 494 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 DNAJB13P59910 316 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 PMPCAQ10713 525 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 PRAMEF20Q5VT98 475 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 ZNF585AQ6P3V2 769 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 ZYG11AQ6WRX3 759 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 LURAP1LQ8IV03 231 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 ACBD4Q8NC06 268 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 NEIL3Q8TAT5 605 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 FAM76AQ8TAV0 307 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 ZNF675Q8TD23 568 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 LCORQ96JN0 433 aaPredicted RBP13.83□□□□□ -0.2
PRKN-207ENST00000479615 ZNF681Q96N22 645 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 TTYH2Q9BSA4 534 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 STMN4Q9H169 189 aaPredicted RBP13.83□□□□□ -0.2
PRKN-207ENST00000479615 EPB41L4BQ9H329 900 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 PROK2Q9HC23 129 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 PNPLA3Q9NST1 481 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 MAT2BQ9NZL9 334 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 BCAP29Q9UHQ4 241 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 RNF6Q9Y252 685 aa13.83□□□□□ -0.2
PRKN-207ENST00000479615 PCNX1Q96RV3 2341 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 ABCB7O75027 752 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 PPM1BO75688 479 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 CAPN3P20807 821 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 MPIP34949 423 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 PPICP45877 212 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 MASP1P48740 699 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 MGAT2Q10469 447 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 CFAP157Q5JU67 520 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 SLC30A6Q6NXT4 461 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 PM20D2Q8IYS1 436 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 MARVELD2Q8N4S9 558 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 CCNYL1Q8N7R7 359 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 DOK4Q8TEW6 326 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 UBLCP1Q8WVY7 318 aaPredicted RBP13.82□□□□□ -0.2
PRKN-207ENST00000479615 C11orf24Q96F05 449 aaPredicted RBP13.82□□□□□ -0.2
PRKN-207ENST00000479615 CNRIP1Q96F85 164 aaPredicted RBP13.82□□□□□ -0.2
PRKN-207ENST00000479615 TMEM41AQ96HV5 264 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 JSRP1Q96MG2 331 aaPredicted RBP13.82□□□□□ -0.2
PRKN-207ENST00000479615 TREX2Q9BQ50 279 aaPredicted RBP13.82□□□□□ -0.2
PRKN-207ENST00000479615 ACPTQ9BZG2 426 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 L2HGDHQ9H9P8 463 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 MID1IP1Q9NPA3 183 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 DLGAP4Q9Y2H0 992 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 CRYBG3Q68DQ2 2970 aa13.82□□□□□ -0.2
PRKN-207ENST00000479615 MYO9AB2RTY4 2548 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 LRRC3CA6NJW4 275 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 AHRRA9YTQ3 701 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 G3V2L1 256 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 TO15178 435 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 CRCPO75575 148 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 HPNP05981 417 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 ABCB1P08183 1280 aaPredicted RBP13.81□□□□□ -0.2
PRKN-207ENST00000479615 GDF1P27539 372 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 TIA1P31483 386 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRKN-207ENST00000479615 GCKP35557 465 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 PEX19P40855 299 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 CASP3P42574 277 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 KIR3DL1P43629 444 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 ZFP36L2P47974 494 aaKnown RBP13.81□□□□□ -0.2
PRKN-207ENST00000479615 NUP107P57740 925 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 FBXW4P57775 412 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 CDSNQ15517 529 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 CEBPEQ15744 281 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 IMPG1Q17R60 797 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 ERCC6LQ2NKX8 1250 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 C1orf185Q5T7R7 199 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 SH2D5Q6ZV89 423 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 NCCRP1Q6ZVX7 275 aaPredicted RBP13.81□□□□□ -0.2
PRKN-207ENST00000479615 TRIM46Q7Z4K8 759 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 SRRM1Q8IYB3 904 aaKnown RBP13.81□□□□□ -0.2
PRKN-207ENST00000479615 OR5M9Q8NGP3 310 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 OR10Q1Q8NGQ4 319 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 TMCO6Q96DC7 493 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 RILPQ96NA2 401 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 HBEGFQ99075 208 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 TRIM8Q9BZR9 551 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 NXF5Q9H1B4 397 aaKnown RBP13.81□□□□□ -0.2
PRKN-207ENST00000479615 GSTO2Q9H4Y5 243 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 RRAGDQ9NQL2 400 aaPredicted RBP13.81□□□□□ -0.2
PRKN-207ENST00000479615 PFDN4Q9NQP4 134 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 SLC35C2Q9NQQ7 365 aa13.81□□□□□ -0.2
PRKN-207ENST00000479615 LIPGQ9Y5X9 500 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms