RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PLLPQ9Y342 182 aa13.2□□□□□ -0.3
ATG4B-218ENST00000479554 CELSR1Q9NYQ6 3014 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF407Q9C0G0 2248 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 TRGV5A0A0B4J1U4 118 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 A0A1W2PS29 197 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 NKX2-6A6NCS4 301 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 HCN1O60741 890 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 GLRA3O75311 464 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 OTCP00480 354 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 GSTA1P08263 222 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 ACVR2AP27037 513 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 SSTR4P31391 388 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 SGO1Q5FBB7 561 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 CCNYL2Q5T2Q4 361 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 HLA-DQA1Q5Y7H0 255 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 RPS27LQ71UM5 84 aaKnown RBP13.19□□□□□ -0.3
ATG4B-218ENST00000479554 CCDC71Q8IV32 467 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-218ENST00000479554 OR4K14Q8NGD5 310 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 LILRB4Q8NHJ6 448 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-218ENST00000479554 C14orf79Q96F83 325 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 DOHHQ9BU89 302 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
ATG4B-218ENST00000479554 ZFP64Q9NPA5 681 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 SLC17A7Q9P2U7 560 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 B4GALT7Q9UBV7 327 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 DCDC2Q9UHG0 476 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 GRID1Q9ULK0 1009 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 CHCHD2Q9Y6H1 151 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-218ENST00000479554 EML6Q6ZMW3 1958 aa13.19□□□□□ -0.3
ATG4B-218ENST00000479554 LRRC3CA6NJW4 275 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 A8MT66 165 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 CAPN14A8MX76 684 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 LRATO95237 230 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 VIMP08670 466 aaKnown RBP13.18□□□□□ -0.3
ATG4B-218ENST00000479554 CT62P0C5K7 136 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 DHRS4L1P0CG22 281 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 NT5EP21589 574 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 DRD4P21917 467 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 ETV4P43268 484 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 TMED10P49755 219 aaKnown RBP13.18□□□□□ -0.3
ATG4B-218ENST00000479554 XKP51811 444 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 MAPK12P53778 367 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 RPS6KA2Q15349 733 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 NTRK2Q16620 822 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 TBCELQ5QJ74 424 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 LETMD1Q6P1Q0 360 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 COMMD6Q7Z4G1 85 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 CPLX4Q7Z7G2 160 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 LRRC34Q8IZ02 419 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 METTL4Q8N3J2 472 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF441Q8N8Z8 693 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 ACBD4Q8NC06 268 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 OR10Q1Q8NGQ4 319 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 SELENOMQ8WWX9 145 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF597Q96LX8 424 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 JSRP1Q96MG2 331 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-218ENST00000479554 FAM111AQ96PZ2 611 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-218ENST00000479554 KCNJ16Q9NPI9 418 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
ATG4B-218ENST00000479554 CNOT11Q9UKZ1 510 aaKnown RBP13.18□□□□□ -0.3
ATG4B-218ENST00000479554 SNX6Q9UNH7 406 aa13.18□□□□□ -0.3
ATG4B-218ENST00000479554 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
ATG4B-218ENST00000479554 A0A1B0GTL3 188 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TP53I11O14683 189 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 WDR1O75083 606 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 PDYNP01213 254 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 RFPL3SP0C7P2 107 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 CPMP14384 443 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TSPAN8P19075 237 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TAC1P20366 129 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 SERPINB4P48594 390 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 CDH13P55290 713 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 NRG3P56975 720 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TLE4Q04727 773 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TFF3Q07654 80 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 FUT7Q11130 342 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 LCA5Q86VQ0 697 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TRIM42Q8IWZ5 723 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 LRRC25Q8N386 305 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-218ENST00000479554 LIX1Q8N485 282 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 LRRC8CQ8TDW0 803 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 DIO2Q92813 273 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TP53INP1Q96A56 240 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TTYH2Q9BSA4 534 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 C1QTNF3Q9BXJ4 246 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 UCK2Q9BZX2 261 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 FAM107BQ9H098 131 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 OR10A5Q9H207 317 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 RABEP2Q9H5N1 569 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 BRF2Q9HAW0 419 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms