RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 RELNP78509 3460 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 TO15178 435 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 HDAC3O15379 428 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 PEX11AO75192 247 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 CBX6O95503 412 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 CBX7O95931 251 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 FBXO45P0C2W1 286 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 PRPS1L1P21108 318 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 DRD5P21918 477 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 NTSP30990 170 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 SOX3P41225 446 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 PPICP45877 212 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 TMED10P49755 219 aaKnown RBP14.3□□□□□ -0.12
C9orf3-217ENST00000479161 EMDP50402 254 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 KCNC4Q03721 635 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 GALNTL6Q49A17 601 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 TTMPQ5BVD1 217 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 HLA-DQA1Q5Y7H0 255 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 OGFOD2Q6N063 350 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 FAM111BQ6SJ93 734 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 HSPBAP1Q96EW2 488 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 AMDHD1Q96NU7 426 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 BRINP2Q9C0B6 783 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 ACBD3Q9H3P7 528 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 ANKRD10Q9NXR5 420 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 NOP53Q9NZM5 478 aaKnown RBP14.3□□□□□ -0.12
C9orf3-217ENST00000479161 NTMQ9P121 344 aa14.3□□□□□ -0.12
C9orf3-217ENST00000479161 EIF3LQ9Y262 564 aaKnown RBP14.3□□□□□ -0.12
C9orf3-217ENST00000479161 ATP6AP2A0A1C7CYW4 349 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 ANKRD33BA6NCL7 494 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 TTC36A6NLP5 189 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 TRPC5OSA6NMA1 111 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 TCP11X1B4DZS4 312 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 SKAP2O75563 359 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 ATP6AP2O75787 350 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 OR6B1O95007 311 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 F10P00742 488 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 GPX3P22352 226 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 NRG3P56975 720 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 IGFBP7Q16270 282 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 NTRK2Q16620 822 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 MAPKAPK3Q16644 382 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 TRMT12Q53H54 448 aaKnown RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 KRTCAP3Q53RY4 240 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 PRR30Q53SZ7 412 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 COLEC12Q5KU26 742 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 FHL5Q5TD97 284 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 TMEM81Q6P7N7 255 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 RGS9BPQ6ZS82 235 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 GALNTL5Q7Z4T8 443 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 CAMKMTQ7Z624 323 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 RIMKLAQ8IXN7 391 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 FNDC5Q8NAU1 212 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 ZFP62Q8NB50 900 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 PSD4Q8NDX1 1056 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 ZFP28Q8NHY6 868 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 PAQR8Q8TEZ7 354 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF75CPQ92670 426 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 PPCDCQ96CD2 204 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 COQ8BQ96D53 544 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 SPACA9Q96E40 222 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 ZBED6CLQ96FA7 236 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 FRMD6Q96NE9 622 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 TSSK3Q96PN8 268 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 BTBD9Q96Q07 612 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 PRPF18Q99633 342 aaKnown RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 AKTIPQ9H8T0 292 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 OLAHQ9NV23 265 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 TAS2R9Q9NYW1 312 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 CNIH4Q9P003 139 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 MAP10Q9P2G4 905 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 C19orf53Q9UNZ5 99 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-217ENST00000479161 ERVK-11Q9UQG0 969 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 NINQ8N4C6 2090 aa14.29□□□□□ -0.12
C9orf3-217ENST00000479161 CLEC18AA5D8T8 446 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF354AO60765 605 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-217ENST00000479161 COQ9O75208 318 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 PSMG1O95456 288 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 JUNP05412 331 aaKnown RBP14.28□□□□□ -0.12
C9orf3-217ENST00000479161 HPCAL1P37235 193 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 TDGF1P3P51864 188 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 CLDN8P56748 225 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 PRSS53Q2L4Q9 553 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 HYAL4Q2M3T9 481 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.28□□□□□ -0.12
C9orf3-217ENST00000479161 TBCELQ5QJ74 424 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 IL23RQ5VWK5 629 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 CLEC18BQ6UXF7 455 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 IL20RBQ6UXL0 311 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 C16orf47Q6ZP98 133 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-217ENST00000479161 LARP4Q71RC2 724 aaKnown RBP eCLIP14.28□□□□□ -0.12
C9orf3-217ENST00000479161 MDGA2Q7Z553 956 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 OR2L13Q8N349 312 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 CLEC18CQ8NCF0 446 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 ADCY4Q8NFM4 1077 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 OR9A2Q8NGT5 310 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 PSMA8Q8TAA3 256 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 PIWIL2Q8TC59 973 aaKnown RBP14.28□□□□□ -0.12
C9orf3-217ENST00000479161 MGARPQ8TDB4 240 aa14.28□□□□□ -0.12
C9orf3-217ENST00000479161 LCORQ96JN0 433 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms