RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ASIC5Q9NY37 505 aa18.96■□□□□ 0.63
VARS-224ENST00000479051 VPS4AQ9UN37 437 aa18.96■□□□□ 0.63
VARS-224ENST00000479051 CAPN14A8MX76 684 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 SCAMP2O15127 329 aaKnown RBP18.95■□□□□ 0.62
VARS-224ENST00000479051 NME2P1O60361 137 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 OR6B1O95007 311 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 LBPP18428 481 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 NME2P22392 152 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 GPC1P35052 558 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 DCAF7P61962 342 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 MRPS35P82673 323 aaKnown RBP18.95■□□□□ 0.62
VARS-224ENST00000479051 EXOSC7Q15024 291 aaKnown RBP18.95■□□□□ 0.62
VARS-224ENST00000479051 TRMT12Q53H54 448 aaKnown RBP18.95■□□□□ 0.62
VARS-224ENST00000479051 HSP90B2PQ58FF3 399 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 RTL4Q6ZR62 310 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 GALNTL5Q7Z4T8 443 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 DNAJB8Q8NHS0 232 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 PIWIL2Q8TC59 973 aaKnown RBP18.95■□□□□ 0.62
VARS-224ENST00000479051 GRHL3Q8TE85 626 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 KAT2AQ92830 837 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 ZBED6CLQ96FA7 236 aaPredicted RBP18.95■□□□□ 0.62
VARS-224ENST00000479051 AMDHD1Q96NU7 426 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 ATP6V1HQ9UI12 483 aa18.95■□□□□ 0.62
VARS-224ENST00000479051 KLRC4-KLRK1H3BQV0 150 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 PLOD3O60568 738 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 COQ9O75208 318 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 CBX7O95931 251 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 TMED10P49755 219 aaKnown RBP18.94■□□□□ 0.62
VARS-224ENST00000479051 NR0B1P51843 470 aaKnown RBP18.94■□□□□ 0.62
VARS-224ENST00000479051 PTGR1Q14914 329 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 ANKRD26P1Q6NSI1 321 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 NATD1Q8N6N6 113 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 GOLM1Q8NBJ4 401 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 FAR1Q8WVX9 515 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 SPACA9Q96E40 222 aaPredicted RBP18.94■□□□□ 0.62
VARS-224ENST00000479051 C7orf26Q96N11 449 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 HES7Q9BYE0 225 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 GLIPR2Q9H4G4 154 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 OLAHQ9NV23 265 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 ZNF446Q9NWS9 450 aa18.94■□□□□ 0.62
VARS-224ENST00000479051 A0A087WV62 115 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 G6PDP11413 515 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 GPX3P22352 226 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 MANFP55145 182 aaKnown RBP18.93■□□□□ 0.62
VARS-224ENST00000479051 IGFBP7Q16270 282 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 PRSS53Q2L4Q9 553 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 CPTPQ5TA50 214 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 TMEM107Q6UX40 140 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 WDR75Q8IWA0 830 aaKnown RBP18.93■□□□□ 0.62
VARS-224ENST00000479051 ZNF441Q8N8Z8 693 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 GALNT11Q8NCW6 608 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 ADIPOR1Q96A54 375 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 ITPAQ9BY32 194 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 ACSS1Q9NUB1 689 aaPredicted RBP18.93■□□□□ 0.62
VARS-224ENST00000479051 DDX18Q9NVP1 670 aaKnown RBP18.93■□□□□ 0.62
VARS-224ENST00000479051 TAS2R9Q9NYW1 312 aa18.93■□□□□ 0.62
VARS-224ENST00000479051 PLOD2O00469 737 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 SDHDO14521 159 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 NADKO95544 446 aaPredicted RBP18.92■□□□□ 0.62
VARS-224ENST00000479051 IFI6P09912 130 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 FBXO45P0C2W1 286 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 MC3RP41968 323 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 CLDN8P56748 225 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 PSPHP78330 225 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 HSPB3Q12988 150 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 OGFOD2Q6N063 350 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 LARP4Q71RC2 724 aaKnown RBP eCLIP18.92■□□□□ 0.62
VARS-224ENST00000479051 ZNF227Q86WZ6 799 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 POGLUT1Q8NBL1 392 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 PSD4Q8NDX1 1056 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 OR7G2Q8NG99 324 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 CIDECQ96AQ7 238 aaPredicted RBP18.92■□□□□ 0.62
VARS-224ENST00000479051 HSPBAP1Q96EW2 488 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 LCORQ96JN0 433 aaPredicted RBP18.92■□□□□ 0.62
VARS-224ENST00000479051 BARD1Q99728 777 aaKnown RBP18.92■□□□□ 0.62
VARS-224ENST00000479051 NTNG1Q9Y2I2 539 aa18.92■□□□□ 0.62
VARS-224ENST00000479051 TP53I11O14683 189 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 ACOX3O15254 700 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 WISP1O95388 367 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 P04436 131 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 PPICP45877 212 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 EMDP50402 254 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 RPP38P78345 283 aaKnown RBP18.91■□□□□ 0.62
VARS-224ENST00000479051 DUSP8Q13202 625 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 ELOAQ14241 798 aaKnown RBP18.91■□□□□ 0.62
VARS-224ENST00000479051 ZNF791Q3KP31 576 aaPredicted RBP18.91■□□□□ 0.62
VARS-224ENST00000479051 ZNF385BQ569K4 471 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 NXNQ6DKJ4 435 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 ZNF551Q7Z340 670 aaPredicted RBP18.91■□□□□ 0.62
VARS-224ENST00000479051 MDGA2Q7Z553 956 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 SPATA19Q7Z5L4 167 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.91■□□□□ 0.62
VARS-224ENST00000479051 ARFGAP2Q8N6H7 521 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 OR7A2PQ8NGA2 310 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 ELP4Q96EB1 424 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 MAGEB18Q96M61 343 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 TAAR6Q96RI8 345 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 DPY30Q9C005 99 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 SACM1LQ9NTJ5 587 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 C19orf53Q9UNZ5 99 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms