RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ABCD3P28288 659 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 MGAT5Q09328 741 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 DDX39BQ13838 428 aaKnown RBP15.58■□□□□ 0.08
VIM-204ENST00000478746 E2F2Q14209 437 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 STEAP4Q687X5 459 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 PODNL1Q6PEZ8 512 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 PDIK1LQ8N165 341 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 RNF175Q8N4F7 328 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 ZNF615Q8N8J6 731 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 RDH11Q8TC12 318 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 STARD4Q96DR4 205 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 PBKQ96KB5 322 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 SLC39A3Q9BRY0 314 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 CD244Q9BZW8 370 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 OR10A5Q9H207 317 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 ACTR8Q9H981 624 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 WDR41Q9HAD4 459 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 ASIC3Q9UHC3 531 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 ADGRE2Q9UHX3 823 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 MAPRE3Q9UPY8 281 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 EXO1Q9UQ84 846 aaKnown RBP15.58■□□□□ 0.08
VIM-204ENST00000478746 ASB4Q9Y574 426 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 WIF1Q9Y5W5 379 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 A0A1W2PR48 441 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 PLPP1O14494 284 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 TGM6O95932 706 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 S100BP04271 92 aaPredicted RBP15.57■□□□□ 0.08
VIM-204ENST00000478746 CRHP06850 196 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 C8BP07358 591 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 RHOXF2BP0C7M4 288 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 CCDC166P0CW27 439 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 NR2F6P10588 404 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 NID1P14543 1247 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 NAGAP17050 411 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 UGT2B10P36537 528 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 FUT7Q11130 342 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 TNK1Q13470 666 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 HEPHL1Q6MZM0 1159 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 NUP54Q7Z3B4 507 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 P4HA3Q7Z4N8 544 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 MEIOBQ8N635 442 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 CNEP1R1Q8N9A8 125 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 C17orf47Q8NEP4 570 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 TMEM171Q8WVE6 324 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 CTHRC1Q96CG8 243 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 PGM2Q96G03 612 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 ZC3HAV1LQ96H79 300 aaKnown RBP15.57■□□□□ 0.08
VIM-204ENST00000478746 MARK4Q96L34 752 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 PIGQQ9BRB3 760 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 OR2B2Q9GZK3 357 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 GALNT9Q9HCQ5 603 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 LYARQ9NX58 379 aaKnown RBP15.57■□□□□ 0.08
VIM-204ENST00000478746 ELOVL5Q9NYP7 299 aa15.57■□□□□ 0.08
VIM-204ENST00000478746 C16orf97H3BN30 126 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 PPM1BO75688 479 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 CT62P0C5K7 136 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 FAM58BPP0C7Q3 252 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 POU2F1P14859 743 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 PAX1P15863 534 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 PIK3R1P27986 724 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 KCNJ5P48544 419 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 FNTAP49354 379 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 LHX2P50458 406 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 GFRA1P56159 465 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 KRTAP1-1Q07627 177 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 DMTNQ08495 405 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 SNTA1Q13424 505 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 FRG1Q14331 258 aaKnown RBP15.56■□□□□ 0.08
VIM-204ENST00000478746 OR4D1Q15615 310 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 DESI1Q6ICB0 168 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 MRM1Q6IN84 353 aaKnown RBP15.56■□□□□ 0.08
VIM-204ENST00000478746 TMEM81Q6P7N7 255 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 VWA1Q6PCB0 445 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 AAGABQ6PD74 315 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 ZNF474Q6S9Z5 364 aaPredicted RBP15.56■□□□□ 0.08
VIM-204ENST00000478746 CYP20A1Q6UW02 462 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 CHMP1BQ7LBR1 199 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 LRRC70Q7Z2Q7 622 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 ZNF550Q7Z398 422 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 BTLAQ7Z6A9 289 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 IFNEQ86WN2 208 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 GALNT12Q8IXK2 581 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 PDPRQ8NCN5 879 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 HUS1BQ8NHY5 278 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 TMEM158Q8WZ71 300 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 LRRC39Q96DD0 335 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 NODALQ96S42 347 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 OSBPL11Q9BXB4 747 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 OPN3Q9H1Y3 402 aaPredicted RBP15.56■□□□□ 0.08
VIM-204ENST00000478746 CXorf56Q9H5V9 222 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 ZNF701Q9NV72 531 aaPredicted RBP15.56■□□□□ 0.08
VIM-204ENST00000478746 TAS2R10Q9NYW0 307 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 KLRF1Q9NZS2 232 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 DLGAP4Q9Y2H0 992 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 TEX264Q9Y6I9 313 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 RAI1Q7Z5J4 1906 aaPredicted RBP15.56■□□□□ 0.08
VIM-204ENST00000478746 EXPH5Q8NEV8 1989 aa15.56■□□□□ 0.08
VIM-204ENST00000478746 PGRMC1O00264 195 aaKnown RBP15.55■□□□□ 0.08
VIM-204ENST00000478746 PGRMC2O15173 223 aa15.55■□□□□ 0.08
VIM-204ENST00000478746 TMPRSS11DO60235 418 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms