RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ASB15Q8WXK1 588 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 ZNF681Q96N22 645 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 GAL3ST4Q96RP7 486 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 RABEP2Q9H5N1 569 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 SH3BGRL2Q9UJC5 107 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 EXO1Q9UQ84 846 aaKnown RBP16.31■□□□□ 0.2
PTPN7-209ENST00000477554 DLGAP4Q9Y2H0 992 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 POLR3HQ9Y535 204 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-209ENST00000477554 A8MVJ9 347 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 NDUFAB1O14561 156 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 PEX1O43933 1283 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 DIAPH2O60879 1101 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 CLDN1O95832 211 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 COX7A2P14406 83 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 ELOAQ14241 798 aaKnown RBP16.3■□□□□ 0.2
PTPN7-209ENST00000477554 EBPQ15125 230 aaKnown RBP16.3■□□□□ 0.2
PTPN7-209ENST00000477554 PIGGQ5H8A4 983 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 GKAP1Q5VSY0 366 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-209ENST00000477554 DESI1Q6ICB0 168 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 MAVSQ7Z434 540 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 PIGWQ7Z7B1 504 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 ZNF615Q8N8J6 731 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 TMEM178AQ8NBL3 297 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 PSD4Q8NDX1 1056 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 OR8K3Q8NH51 312 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 SSC4DQ8WTU2 575 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 MAELQ96JY0 434 aaKnown RBP16.3■□□□□ 0.2
PTPN7-209ENST00000477554 WWTR1Q9GZV5 400 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 WDR41Q9HAD4 459 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 HPF1Q9NWY4 346 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 COPS7AQ9UBW8 275 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 SEC14L3Q9UDX4 400 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 GIMAP2Q9UG22 337 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 MCM8Q9UJA3 840 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 ERVK-11Q9UQG0 969 aa16.3■□□□□ 0.2
PTPN7-209ENST00000477554 SDHDO14521 159 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 CRYABP02511 175 aaKnown RBP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 JUNP05412 331 aaKnown RBP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 NT5EP21589 574 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 TACR1P25103 407 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 COL8A1P27658 744 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 TIA1P31483 386 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 IDH3AP50213 366 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 MRPS35P82673 323 aaKnown RBP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 ALDH6A1Q02252 535 aaKnown RBP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 NNATQ16517 81 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 SLC9B1Q4ZJI4 515 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 TRMT12Q53H54 448 aaKnown RBP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 XKR7Q5GH72 579 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 FJX1Q86VR8 437 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 ZNF441Q8N8Z8 693 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 OR52N2Q8NGI0 321 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 DNAJB8Q8NHS0 232 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 ACTRT2Q8TDY3 377 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 KLHL29Q96CT2 875 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 PPP1R36Q96LQ0 422 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 PPP3R2Q96LZ3 170 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 TMEM120AQ9BXJ8 343 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 DIDO1Q9BTC0 2240 aaKnown RBP16.29■□□□□ 0.2
PTPN7-209ENST00000477554 EXPH5Q8NEV8 1989 aa16.29■□□□□ 0.2
PTPN7-209ENST00000477554 C1orf226A1L170 272 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 WIPF3A6NGB9 483 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 NPIPB8E9PQR5 432 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 HS6ST1O60243 411 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 RSL1D1O76021 490 aaKnown RBP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PORP16435 677 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PRPH2P23942 346 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 EPHA3P29320 983 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PIGAP37287 484 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 DNASE1L1P49184 302 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 ACSM2AQ08AH3 577 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 FUT7Q11130 342 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PRICKLE4Q2TBC4 344 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 ZNF791Q3KP31 576 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 ATP6AP1LQ52LC2 224 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 SPDYAQ5MJ70 313 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 ACSM2BQ68CK6 577 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 BICRALQ6AI39 1079 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 RNF111Q6ZNA4 994 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 Q6ZSR9 355 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 GALNT12Q8IXK2 581 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PRR22Q8IZ63 422 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 OR5M3Q8NGP4 307 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 CEP70Q8NHQ1 597 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 CDC26Q8NHZ8 85 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 NUBPLQ8TB37 319 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 C10orf82Q8WW14 230 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 TMEM125Q96AQ2 219 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 TUBGCP3Q96CW5 907 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 METTL2AQ96IZ6 378 aaKnown RBP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 EGLN2Q96KS0 407 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 C3orf30Q96M34 536 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 GPR137Q96N19 417 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 RILPQ96NA2 401 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PROK2Q9HC23 129 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 SH2D2AQ9NP31 389 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 TCF7L2Q9NQB0 619 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms