RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RARRES3Q9UL19 164 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 EMCNQ9ULC0 261 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 FOXJ3Q9UPW0 622 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 U3KQV3 271 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 CUX2O14529 1486 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 FAM230AA0A1W2PPH8 454 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 ASB14A6NK59 587 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 A8MXK9 166 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 LGALS8O00214 317 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 GUCA1CO95843 209 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 AK1P00568 194 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 PTMAP06454 111 aaKnown RBP4.81□□□□□ -1.64
VPS50-212ENST00000476413 HEXBP07686 556 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 TRIM49P0CI25 452 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 TRIM49CP0CI26 452 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 NCF1P14598 390 aaPredicted RBP4.81□□□□□ -1.64
VPS50-212ENST00000476413 ACAA2P42765 397 aaKnown RBP4.81□□□□□ -1.64
VPS50-212ENST00000476413 PGFP49763 221 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 CD300CQ08708 224 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 ELAVL2Q12926 359 aaKnown RBP4.81□□□□□ -1.64
VPS50-212ENST00000476413 FCN2Q15485 313 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 SHROOM1Q2M3G4 852 aaPredicted RBP4.81□□□□□ -1.64
VPS50-212ENST00000476413 ATRAIDQ6UW56 229 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 MOB2Q70IA6 237 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 RANBP3LQ86VV4 465 aaPredicted RBP4.81□□□□□ -1.64
VPS50-212ENST00000476413 GPBP1Q86WP2 473 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 Q8N377 158 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 BIRC7Q96CA5 298 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 ZNF597Q96LX8 424 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 ANKRD27Q96NW4 1050 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 AGAP3Q96P47 875 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 IWS1Q96ST2 819 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 HSD17B14Q9BPX1 270 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 LRRC61Q9BV99 259 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 GPR174Q9BXC1 333 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 COQ10BQ9H8M1 238 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 IL1RL2Q9HB29 575 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 VAT1LQ9HCJ6 419 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 MUTYHQ9UIF7 546 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 PURGQ9UJV8 347 aaKnown RBP4.81□□□□□ -1.64
VPS50-212ENST00000476413 MGAT4BQ9UQ53 548 aa4.81□□□□□ -1.64
VPS50-212ENST00000476413 IGHV3-16A0A0C4DH30 117 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 A0A1W2PPR1 153 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 RNF212BA8MTL3 300 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 H3BMH7 237 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 PDHXO00330 501 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 CYB561D2O14569 222 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 IMPA2O14732 288 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 VPS26AO75436 327 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 SCGB2A1O75556 95 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 TOM1L1O75674 476 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 POP4O95707 220 aaKnown RBP4.8□□□□□ -1.64
VPS50-212ENST00000476413 ECDO95905 644 aaPredicted RBP4.8□□□□□ -1.64
VPS50-212ENST00000476413 SLC1A4P43007 532 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 HSF2Q03933 536 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 KLHL30Q0D2K2 578 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 PCK2Q16822 640 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 GLIPR1L2Q4G1C9 344 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 CEP85LQ5SZL2 805 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 FAAP20Q6NZ36 180 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 ARSKQ6UWY0 536 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 ADAMTSL5Q6ZMM2 481 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 RNF130Q86XS8 419 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 SAMD12Q8N8I0 201 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 OR4F17Q8NGA8 305 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 FLVCR1-AS1Q8TAF5 88 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 NPRL2Q8WTW4 380 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 DLX4Q92988 240 aaPredicted RBP4.8□□□□□ -1.64
VPS50-212ENST00000476413 OR4F4Q96R69 305 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 ATF6BQ99941 703 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 GFRA4Q9GZZ7 299 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 RWDD1Q9H446 243 aaPredicted RBP4.8□□□□□ -1.64
VPS50-212ENST00000476413 GPR83Q9NYM4 423 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 TAS2R16Q9NYV7 291 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 BLOC1S6Q9UL45 172 aa4.8□□□□□ -1.64
VPS50-212ENST00000476413 PARD3Q8TEW0 1356 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 PCNX3Q9H6A9 2034 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 A0A087WZY1 265 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 RANBP6O60518 1105 aaKnown RBP4.79□□□□□ -1.64
VPS50-212ENST00000476413 ZNF883P0CG24 379 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 RRASP10301 218 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 LMO2P25791 158 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 OXTRP30559 389 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 RFC2P35250 354 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 ADRA1AP35348 466 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 SAA4P35542 130 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 MTTPP55157 894 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 RAG2P55895 527 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 HSD17B7P56937 341 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 HAND2P61296 217 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 ZNF85Q03923 595 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 CD226Q15762 336 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 PARP6Q2NL67 630 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 ANKRD55Q3KP44 614 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 LINC00242Q5T6M2 205 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 C9orf66Q5T8R8 295 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 AGAP7PQ5VUJ5 663 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 ZNF343Q6P1L6 599 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 ERASQ7Z444 233 aa4.79□□□□□ -1.64
VPS50-212ENST00000476413 LUZP1Q86V48 1076 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms