RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 OR7G1Q8NGA0 311 aa11.97□□□□□ -0.49
MRPL55-228ENST00000476267 OR4K14Q8NGD5 310 aa11.97□□□□□ -0.49
MRPL55-228ENST00000476267 HGDQ93099 445 aa11.97□□□□□ -0.49
MRPL55-228ENST00000476267 HSPBAP1Q96EW2 488 aa11.97□□□□□ -0.49
MRPL55-228ENST00000476267 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
MRPL55-228ENST00000476267 NXF5Q9H1B4 397 aaKnown RBP11.97□□□□□ -0.49
MRPL55-228ENST00000476267 NOL11Q9H8H0 719 aaKnown RBP11.97□□□□□ -0.49
MRPL55-228ENST00000476267 ZDHHC18Q9NUE0 388 aa11.97□□□□□ -0.49
MRPL55-228ENST00000476267 MTRF1LQ9UGC7 380 aaKnown RBP11.97□□□□□ -0.49
MRPL55-228ENST00000476267 PCTPQ9UKL6 214 aa11.97□□□□□ -0.49
MRPL55-228ENST00000476267 PLEKHA6Q9Y2H5 1048 aa11.97□□□□□ -0.49
MRPL55-228ENST00000476267 RPH3AQ9Y2J0 694 aaPredicted RBP11.97□□□□□ -0.49
MRPL55-228ENST00000476267 UTP11Q9Y3A2 253 aaKnown RBP11.97□□□□□ -0.49
MRPL55-228ENST00000476267 STX16-NPEPL1H3BU86 382 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 STX16O14662 325 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 PPM1BO75688 479 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 TRAPPC6AO75865 159 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 IL2RAP01589 272 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 ATP1B1P05026 303 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 KLK1P06870 262 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 NAGAP17050 411 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 SLCO1A2P46721 670 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 XKP51811 444 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 NRG3P56975 720 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 ADAM8P78325 824 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 SORDQ00796 357 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 DUSP2Q05923 314 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 GALNT1Q10472 559 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-228ENST00000476267 WIPI1Q5MNZ9 446 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-228ENST00000476267 C10orf62Q5T681 223 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-228ENST00000476267 FRG2Q64ET8 278 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 SLC48A1Q6P1K1 146 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 PACS2Q86VP3 889 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 PTGR2Q8N8N7 351 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-228ENST00000476267 C9orf106Q8NAJ2 232 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 FAM83FQ8NEG4 500 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-228ENST00000476267 ZPLD1Q8TCW7 415 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 CTHRC1Q96CG8 243 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 NSUN5Q96P11 429 aaKnown RBP11.96□□□□□ -0.49
MRPL55-228ENST00000476267 FRG2BQ96QU4 278 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 NODALQ96S42 347 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 FUT8Q9BYC5 575 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 RAB17Q9H0T7 212 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 PLEKHF2Q9H8W4 249 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 CALHM2Q9HA72 323 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 MAT2BQ9NZL9 334 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.49
MRPL55-228ENST00000476267 CAMK2AQ9UQM7 478 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 PCDHA9Q9Y5H5 950 aa11.96□□□□□ -0.49
MRPL55-228ENST00000476267 SPG11Q96JI7 2443 aa11.96□□□□□ -0.5
MRPL55-228ENST00000476267 MAP1AP78559 2803 aaPredicted RBP11.96□□□□□ -0.5
MRPL55-228ENST00000476267 MTORP42345 2549 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 NIPBLQ6KC79 2804 aaeCLIP11.95□□□□□ -0.5
MRPL55-228ENST00000476267 GNB5O14775 395 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 SNPHO15079 494 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 ATE1O95260 518 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 CBX7O95931 251 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 IL18BPO95998 194 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 RHOXF2BP0C7M4 288 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 EPXP11678 715 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 PORP16435 677 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-228ENST00000476267 DNASE1P24855 282 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 CTSSP25774 331 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 MASP1P48740 699 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 SERPINB8P50452 374 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 MAP4K2Q12851 820 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 SF3B4Q15427 424 aaKnown RBP eCLIP11.95□□□□□ -0.5
MRPL55-228ENST00000476267 FAM219BQ5XKK7 198 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 HLA-DQA1Q5Y7H0 255 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 FAM111BQ6SJ93 734 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 CAMKMTQ7Z624 323 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 MMP21Q8N119 569 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 VWA5B2Q8N398 1253 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 ABTB1Q969K4 478 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-228ENST00000476267 UCN2Q96RP3 112 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 TRIB1Q96RU8 372 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 G6PC3Q9BUM1 346 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 ITPAQ9BY32 194 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 EPB41L4BQ9H329 900 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 ACSS3Q9H6R3 686 aa11.95□□□□□ -0.5
MRPL55-228ENST00000476267 ANKHD1Q8IWZ3 2542 aaKnown RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 A0A1W2PPR1 153 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 ESYT3A0FGR9 886 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 C1orf226A1L170 272 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 CDH16O75309 829 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 GOSR1O95249 250 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 ACTL6AO96019 429 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 RPS17P08708 135 aaKnown RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 SBK3P0C264 359 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 CPN1P15169 458 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 FOSL1P15407 271 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 NT5EP21589 574 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 TYK2P29597 1187 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 OPRM1P35372 400 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 EMDP50402 254 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 CCNG1P51959 295 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 AGFG1P52594 562 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms