RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 ZDHHC2Q9UIJ5 367 aa12.13□□□□□ -0.47
NIPAL3-206ENST00000475663 LIPGQ9Y5X9 500 aa12.13□□□□□ -0.47
NIPAL3-206ENST00000475663 PTPN13Q12923 2485 aa12.13□□□□□ -0.47
NIPAL3-206ENST00000475663 HIVEP3Q5T1R4 2406 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 ATP6AP2A0A1C7CYW4 349 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 OR6C76A6NM76 312 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 SLC28A1O00337 649 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 CCL21O00585 134 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 CDK2AP1O14519 115 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 ATP6AP2O75787 350 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 JUNP05412 331 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 ABOP16442 354 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 EFNA1P20827 205 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 SERPINB4P48594 390 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 MAP4K2Q12851 820 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 HEPACAMQ14CZ8 416 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 KIAA0040Q15053 153 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 RFTN2Q52LD8 501 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 ZNF628Q5EBL2 1059 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 SLC22A10Q63ZE4 541 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 SPPL2CQ8IUH8 684 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 GHDCQ8N2G8 530 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 ANKRD42Q8N9B4 389 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 PPP1R14CQ8TAE6 165 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 NUDT8Q8WV74 236 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 CTHRC1Q96CG8 243 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 PPP1R36Q96LQ0 422 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 JSRP1Q96MG2 331 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 BBS4Q96RK4 519 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 FAM173AQ9BQD7 235 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 TRMOQ9BU70 441 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 TTTY12Q9BZ98 90 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 MYNNQ9NPC7 610 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 MIEF1Q9NQG6 463 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 SIRT5Q9NXA8 310 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 PLEKHB1Q9UF11 243 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 POLEQ07864 2286 aa12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 USP9YO00507 2555 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-206ENST00000475663 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 H3BQF6 201 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 RGS14O43566 566 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 PEX11AO75192 247 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 RFPL3SP0C7P2 107 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 DDCP20711 480 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 CA7P43166 264 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 MAGEA5P43359 124 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 EMDP50402 254 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 NCBP2P52298 156 aaKnown RBP eCLIP12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 RBPJQ06330 500 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 FOXO1Q12778 655 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 KRTCAP3Q53RY4 240 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 ZNF385BQ569K4 471 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 WDR53Q7Z5U6 358 aaPredicted RBP12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 CLYBLQ8N0X4 340 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 TAGAPQ8N103 731 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 SLC15A4Q8N697 577 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 TMEM251Q8N6I4 163 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 GOLM1Q8NBJ4 401 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 POGLUT1Q8NBL1 392 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 OR7G2Q8NG99 324 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 OR7G1Q8NGA0 311 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 PAQR8Q8TEZ7 354 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 DIO2Q92813 273 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 SGCZQ96LD1 299 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 PAIP2Q9BPZ3 127 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 EML4Q9HC35 981 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 SH2D2AQ9NP31 389 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 GIMAP4Q9NUV9 329 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 SENP1Q9P0U3 644 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 CNOT11Q9UKZ1 510 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 HRH3Q9Y5N1 445 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 NPFFR2Q9Y5X5 522 aa12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 CHCHD2Q9Y6H1 151 aaPredicted RBP12.11□□□□□ -0.47
NIPAL3-206ENST00000475663 ZGRF1Q86YA3 2104 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 A0A1B0GUH1 482 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 LSM1O15116 133 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 HSPA4LO95757 839 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 CHEK2O96017 543 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 TPOP07202 933 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 FGF4P08620 206 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 GP1BBP13224 206 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 SDC1P18827 310 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 BGNP21810 368 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 MC3RP41968 323 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 CORO7P57737 925 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 KCNJ2P63252 427 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 NTRK2Q16620 822 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 TNFAIP8L3Q5GJ75 292 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 TMEM107Q6UX40 140 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 GK5Q6ZS86 529 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 ZNF551Q7Z340 670 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 FAM9CQ8IZT9 166 aa12.1□□□□□ -0.47
NIPAL3-206ENST00000475663 OR6Y1Q8NGX8 325 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms